Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq108 96.9 3e-15 >seq108 Length=566964 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 37404 AGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATT 37463 ||||| ||||||||||| ||| | ||| | ||||||| |||||||||||||| ||||| Sbjct 477307 AGCTATTTCGCAACTAGCTTCCAACGCGCCGTAATATAGCGTTTCGAAAATTTGAATATT 477366 Query 37464 TAATATTTTTGC-TTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCA 37522 | | || || ||||| ||| || || | ||| | || || |||||| |||| |||| Sbjct 477367 GAGTTCGTTAGCGTTCTT-GCTTTCAAACGGATATCTCATCAAGATAAACGCATCTGCCA 477425 Query 37523 AACCCTGAACACCGATACCT 37542 |||| || || || |||||| Sbjct 477426 AACCTTGTACGCCAATACCT 477445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468486404392640