Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq179 242 2e-59 >seq179 Length=330037 Score = 242 bits (268), Expect = 2e-59 Identities = 368/521 (71%), Gaps = 2/521 (0%) Strand=Plus/Minus Query 3618 ATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGT 3677 |||||||| | || ||||| || |||||||||||||| ||||| || || ||||| | | Sbjct 282684 ATGAATTGTTGTACTTTGCCGATGTATGCGCTGGTCCGGGTGGATTTAGCGAATACGTAT 282625 Query 3678 TATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGCGaaaaaaaTGATT 3737 ||| || | || ||| || || || | ||| | || || ||||||||||||| Sbjct 282624 TATCAAGGACAAAGTGGCATGCAAAGGGATTTGGATTTACTTTGAAAGAAAAAAATGATT 282565 Query 3738 TTCAACTGAACAGATTTTACGATA-ACTTTTCGGAAACTTTACACCCGTATTATGGTCCG 3796 | || || || | | | || | || |||| || ||||| ||||| || || Sbjct 282564 TCACTTTGGACGAGTTCTTTGCTGGACCTAGCG-AAACGTTTCACCCTTATTACGGACCT 282506 Query 3797 CTTAACGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTTGTGAAATGATTATG 3856 | | |||| || | || | | | ||||||| |||| ||| | | |||| ||| Sbjct 282505 TTGGATAATGGAGATGTGTATGAGTTAGAAAATCAAGAAGGATTTAGAAACTTGATAATG 282446 Query 3857 AAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAG 3916 ||| |||| || || || || |||||||||||||| || || ||||| || |||||| Sbjct 282445 AAACATACACAAAATAAGGGAGTTCATTTTATGATGGCAGATGGAGGGTTTTCTGTTGAG 282386 Query 3917 GGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATT 3976 |||||||||||||| ||||| || || || ||| | | ||||| ||||||||| | | Sbjct 282385 GGTCAAGAAAATATACAAGAGATTTTGTCTAAACAACTATATTTATGTCAATGTCTGGTG 282326 Query 3977 GCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACA 4036 ||||||||| | | ||| ||||| |||| ||| | ||| | ||||| | || || Sbjct 282325 GCATTGATGGTAGTTAGAAAAGGTGGACATTTTGTGACAAAACTCTTCGACTTGTTCACG 282266 Query 4037 CCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTC 4096 || |||||||| || | || ||| ||||||| |||| || ||| ||||||| ||||| Sbjct 282265 CCCTTTAGTGCCGGCCTTGTCTATCTGATGTACAGATGCTTCAATAGTATTTGCATTTTT 282206 Query 4097 AAACCACATTCATCGCGACCGGCCAATTCTGAAAGATATTT 4137 ||||| || || ||||||| ||||| ||| | ||||| Sbjct 282205 AAACCTAATAGTTCCAGACCGGCTAATTCAGAACGTTATTT 282165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276531503021668