Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq150 98.7 1e-15 seq160 86.0 6e-12 >seq150 Length=403005 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||||||||| | ||||| ||| | ||||| | ||| | ||| | Sbjct 341176 ATGCAGATCTTTGTAAAAACTCTTACTGGGAAAACCATCACTTTGGAAGTCGAAGCTTCA 341235 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || || || ||| ||||||||||| || ||||| ||||| Sbjct 341236 GATACCATAGAAAATGTTAAGGCCAAAATTCAGGACAAAGAAGGAATTCCTCCTGATCAG 341295 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | |||| | ||| || ||||| ||||||| |||| | | ||| || ||| Sbjct 341296 CAGCGTTTGATTTTTGCCGGTAAGCAACTAGAAGATGGAAGAACCCTTTCCGATTACAAC 341355 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || |||||||| || | || || || || | ||| ||||||||| Sbjct 341356 ATCCAGAAAGAATCCACACTTCACCTTGTTTTGCGCCTTCGAGGAGGAA 341404 >seq160 Length=383029 Score = 86.0 bits (94), Expect = 6e-12 Identities = 153/217 (71%), Gaps = 10/217 (5%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || ||| | || || ||| | ||||| | || | ||| | Sbjct 144193 ATGCAAATATTCGTCAAGACACTCACAGGTAAAACCATCACTCTGGAGGTCGAAGCGTCG 144252 Query 26829 GACACCATCGAGCAAGTCAAA--CAAAAGATTAC-CGACAAAGAAGGGATACCTCCCGAT 26885 |||||||||||| | |||||| ||||| ||| || |||||||| || ||||| ||| Sbjct 144253 GACACCATCGAGAATGTCAAAGCCAAAA---TACAGGATAAAGAAGGAATTCCTCCGGAT 144309 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGA-TGATAGAAAC-GTCAGCGACT 26943 || || ||| | || | || ||| || || ||||| || || | || ||| |||| Sbjct 144310 CAGCAGAGATTGATCTTCGCCGGAAAGCAGCTCGAGGACGGACGCACACTGTC--GGACT 144367 Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | ||||| || |||||||| ||| | ||| |||| || Sbjct 144368 ACAACATCCAGAAAGAATCAACTCTACATTTGGTACT 144404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478623173616320