Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq138 123 6e-23 >seq138 Length=435971 Score = 123 bits (136), Expect = 6e-23 Identities = 172/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 111314 TTTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTG 111373 ||||||| | | ||||| || ||| || |||| | | | || ||||| | || || Sbjct 421054 TTTTCCATTATTGACAACTAAAAGAATATTTTGGCGAGCAGTAGTTGAAGAGTTACTTTG 421113 Query 111374 GTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGA 111433 |||||| || |||||| | || ||||| ||||| |||||||| | |||||||| Sbjct 421114 GTTTATCAAAGGCTCAACAAATTCTAAAGAACTGGCAGCCAAAAATGTTCATATTTGGGA 421173 Query 111434 TGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGTGA 111493 || ||||| ||||| ||||| | ||||| ||| || ||| | |||| || || Sbjct 421174 TGAGAATGGTTCACGGGACTTCTTGGATTCTTATGGCTTTACCGATAGGAAAGAGGGCGA 421233 Query 111494 TCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCA 111553 ||||||||| |||| || ||||| ||| | || |||||||| || ||||| |||||| Sbjct 421234 TCTCGGACCTATTTATGGTTTTCAGTGGAGACATTTTGGTGCCGAGTACAAGGACATGCA 421293 Query 111554 C 111554 | Sbjct 421294 C 421294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303244119926792