Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq848 82.4 2e-12 >seq848 Length=46727 Score = 82.4 bits (90), Expect = 2e-12 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 3373 TTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCG 3432 || ||||||||||||||||||||| | | ||| |||| ||||||||| | ||| Sbjct 42323 TTCCACAAATACGGTCCTTCGGGCACGATACAAAGACACGACTCACTCTGCATTTTGCCG 42382 Query 3433 GAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGCC 3492 ||| | ||||||||||||| || |||||| | ||||||||||| | ||||| Sbjct 42383 CTCAACATCGTCAACGAGAAGACGTATATTTTCATTTGGTTCTGGTTTATTTTACTAGCT 42442 Query 3493 ATCAT 3497 ||||| Sbjct 42443 ATCAT 42447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479105106000