Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq63 93.3 7e-14 >seq63 Length=804878 Score = 93.3 bits (102), Expect = 7e-14 Identities = 141/200 (71%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG 159807 ||| |||||||| |||||||||||||| | ||||| | ||| | || || || | ||| Sbjct 5240 CAATCTGTCTGCGACAAATTCGATGTAAGTGCACATGAGTTCAGAATTCATTCCTATCAG 5181 Query 159808 CCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAAT 159867 ||||| || | |||||| | || ||| ||||| || ||| | || || || | | ||| Sbjct 5180 GCTAACCGGTAACGCTTCTGTCAAAAATTCCTTTTCGATCACCACAGCATCCATTATAAT 5121 Query 159868 CTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGC 159927 ||| || |||||| || |||||| | ||||| || |||| || ||||| Sbjct 5120 CTGTTTCACGCGTTCGAACGACGGCTTTTGAACTATGTG---TTTGAACATTAGACACGC 5064 Query 159928 AAAGTCGCAGTGCAGTCCCT 159947 || || || |||| ||||| Sbjct 5063 GAAATCACAATGCAATCCCT 5044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795090037031360