Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq63 102 1e-16 >seq63 Length=804878 Score = 102 bits (112), Expect = 1e-16 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 |||||| ||||| || ||||| |||||| |||||||||||| || | | | || |||| Sbjct 4576 ATCTGTAATATATGTTTCAATGAGTAAAGAATACATTTCAGAATGGACAGTCTCTATAGT 4517 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTT 37558 |||||| |||||| | || |||| |||| || || | | || |||| Sbjct 4516 GGCCTGAAAGATATAAAAGAAATAGGCCTCAGGCAATTTTACCTCCTGGCAGAATCTCTC 4457 Query 37559 AGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTAT 37618 | ||| ||||||||||| ||||| ||| ||| |||||||| || | |||| || Sbjct 4456 AATTAAATTTTCATTAACAATCCCGTCAGAAGCAGCAAAGAATGCTAATACATGGGAGAT 4397 Query 37619 AAAATGTCTTTCAT 37632 |||||||||||||| Sbjct 4396 AAAATGTCTTTCAT 4383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592268259638240