Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq150 86.0 5e-12 >seq150 Length=403005 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||||||||| | || || |||||||| || ||| ||| ||||| Sbjct 341176 ATGCAGATCTTTGTAAAAACTCTTACTGGGAAAACCATCACTTTGGAAGTCGAAGCTTCA 341235 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| ||||| |||||||| ||| | || ||||| Sbjct 341236 GATACCATAGAAAATGTTAAGGCCAAAATTCAGGACAAAGAAGGAATTCCTCCTGATCAG 341295 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | | || ||||| || || ||| | |||||| | ||| | ||||||| ||| Sbjct 341296 CAGCGTTTGATTTTTGCCGGTAAGCAACTAGAAGATGGAAGAACCCTTTCCGATTACAAC 341355 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || |||||||| || || ||| | || || | | |||||||| || Sbjct 341356 ATCCAGAAAGAATCCACACTTCACCTTGTTTTGCGCCTTCGAGGAGGAAT 341405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425370809624724