Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq265 93.3 7e-13 seq45 93.3 7e-13 >seq265 Length=193763 Score = 93.3 bits (102), Expect = 7e-13 Identities = 169/245 (69%), Gaps = 8/245 (3%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| ||||| || |||||||| || || ||||||||| |||||| ||| ||| | | Sbjct 179505 TGTATTTGGTAACAGCCTTGGTGCCTTCACTCACGGCGTGCTTGGCCAATTCTCCGGGTA 179446 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT----TA 1485585 | || | || || || |||||||| |||| ||||| || ||| | || Sbjct 179445 GCAGAAGCCTAACAGCAGTTTGGATCTCCCGGGAAGTAATCGT--TGATCTTTTATTGTA 179388 Query 1485586 GTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAG 1485645 |||||| | ||| | ||||||| | ||||| |||| | ||||||||||| Sbjct 179387 GTGCGCCAAACGCGAC--GCCTCGGCAGCAATGCGCTCGAAGACATCGTTGACAAAGCTA 179330 Query 1485646 TTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACC 1485705 |||||||| ||| | |||| ||||||| || ||| || || || || || | |||| Sbjct 179329 TTCATGATGCTCATAGCTTTGCTGGAGATTCCAGTGTCCGGATGTACTTGTTTCAACACC 179270 Query 1485706 TTGTA 1485710 ||||| Sbjct 179269 TTGTA 179265 >seq45 Length=957154 Score = 93.3 bits (102), Expect = 7e-13 Identities = 165/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| ||||||||||| || || ||||| ||| |||||| |||||| ||| ||| | | Sbjct 873635 TGTATTTGGTGACGGCTTTAGTTCCCTCACTGACAGCGTGCTTGGCCAATTCTCCGGGTA 873694 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | || |||||||| ||||| || | |||||| | ||||| Sbjct 873695 GCAGAAGCCTAACCGCGGTCTGTATCTCACGAGAAGTGATCGTCGATCTTTTGTTGTAAT 873754 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| | ||||||| | | || | |||| || ||||||||| || ||||| Sbjct 873755 GCGCCAATCTTGACGCCTCGGCGGCAATTCTCTCGAACACGTCGTTGACGAAACTGTTCA 873814 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | || |||| || || ||| || ||||| ||||| | |||||||| Sbjct 873815 TGATGCTCATGGCCTTACTGGAAATTCCAGTGTCCGGATGCACTTGCTTCAACACCTTGT 873874 Query 1485710 A 1485710 | Sbjct 873875 A 873875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915549008378084