Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq150 118 2e-21 >seq150 Length=403005 Score = 118 bits (130), Expect = 2e-21 Identities = 137/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| ||| | ||||| | || |||||||| ||||| |||| || || | | | Sbjct 341405 TGCAAATCTTCGTGAAAACTCTCACTGGAAAAACCATTACCCTTGAAGTCGAGGCCTCA- 341463 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || ||||| ||||||||||| |||||| ||| |||||||||||||| ||||||||| Sbjct 341464 GACACTATAGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCCGATCAA 341523 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | || || ||||| |||||||| || || ||| ||||| | | ||||| || Sbjct 341524 CAACGTCTAATCTTTGCTGGTAAACAGTTGGAAGATGGAAGAACCCTTTCCGATTACAAC 341583 Query 146211 AT 146212 || Sbjct 341584 AT 341585 Score = 109 bits (120), Expect = 9e-19 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 146101 AAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCA 146160 ||||||||||| ||| || ||| |||||||||||||| |||||||||||| | || | Sbjct 341892 AAAATGTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCCGATCAACAACGTCTAA 341951 Query 146161 TTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAG 146220 | ||||| |||||||| || || ||| ||||| | | ||||| || || || |||| Sbjct 341952 TCTTTGCTGGTAAACAGTTGGAAGATGGAAGAACTCTTTCTGATTACAACATCCAGAAAG 342011 Query 146221 AATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 |||| || | |||||||| || || | | |||||| Sbjct 342012 AATCCACACTACATTTAGTTTTGAGACTTCGGGGAGGT 342049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786101973663520