Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq592 86.0 1e-11 >seq592 Length=65153 Score = 86.0 bits (94), Expect = 1e-11 Identities = 161/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 142968 GATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCCGTCTTGCATATAGAACTT 143027 |||| || ||| ||| || | ||| || | | |||||||| ||||| ||||| || Sbjct 1450 GATACAGTTGAATGGGCTGCCTGGCAAGATCGAGGTGATCCCGTGTTGCACATAGAT-TT 1508 Query 143028 AGGAGA-TGGGCGGATGTTTTTCTTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAAT 143086 | | | |||||||| | ||| | |||||||| | || ||||| | | ||||| Sbjct 1509 GGTAAAGTGGGCGGACATATTTGTGATAGCGCCGCTGGATGCCAATACTCTGGGCAAAAT 1568 Query 143087 AGCCAACGGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGATATAAATAA 143146 |||| ||| |||||||| ||| | || || | | | | | | || |||||| | || Sbjct 1569 CGCCAGCGGCATATGCGACAATATCCTCACGTGTGTGGCACGCGCTTGGGATCCTACAAA 1628 Query 143147 ACCTCTTATTTTTTGTCCCGCTATGAATAGCCTTATGTGGGAACATCCTATTAC 143200 || ||| | || ||||| |||||||| | |||||||||||||| || || Sbjct 1629 GCCGCTTTTGTTCTGTCCTGCTATGAACACTAGGATGTGGGAACATCCGATCAC 1682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903337165452160