Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq61 120 7e-22 seq1511 105 2e-17 seq25 98.7 2e-15 >seq61 Length=808599 Score = 120 bits (132), Expect = 7e-22 Identities = 179/250 (72%), Gaps = 13/250 (5%) Strand=Plus/Plus Query 72167 TTACTTTGCCAAACACAACGTGTTTGTTATTTAAATGTGGTTGAGGT--GCAAGTGTAAT 72224 ||||| ||||||| |||||||||||| || ||| | |||| | ||| ||| || Sbjct 591534 TTACTCTGCCAAAGACAACGTGTTTGCCATCTAA--GAAGTTGCATTTGGCACATGTGAT 591591 Query 72225 GAAGAATTGCGAGTTATTTGAATCAGGACCCGAGTTAGCCATAGAAACCAAACCTGCTTC 72284 ||||||||| || ||| | ||| || |||||||||||| | ||| |||| | Sbjct 591592 GAAGAATTGACAGCCATTAGTATCCTTGCCACTGTTAGCCATAGATAACAACCCTGGTGA 591651 Query 72285 TGAATGCTTTAATAAGAAATTCTCATCTTCAAAAGTTTCTCCA---TATATACT---TTG 72338 |||||| | ||||||||||||||| ||| ||| | ||| || ||||| | Sbjct 591652 ATCATGCTTGAGCAAGAAATTCTCATCTGGAAATGTTCCACCACTGTAGATACTCAATAC 591711 Query 72339 ACCTGAGCTTCCATCAAAGTTCACAATATCACCTCCTTGAACCATAAAATTATTAATTAC 72398 |||| |||||||| ||| |||| |||||| ||||| | |||||||| ||||| || Sbjct 591712 TCCTG---TTCCATCACCGTTGACAAAATCACCGCCTTGTATCATAAAATCCTTAATCAC 591768 Query 72399 TCTATGGAAA 72408 ||| |||||| Sbjct 591769 TCTGTGGAAA 591778 >seq1511 Length=28125 Score = 105 bits (116), Expect = 2e-17 Identities = 122/159 (77%), Gaps = 4/159 (3%) Strand=Plus/Plus Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395 |||||| |||| ||| ||||||| || ||| |||||||| ||| ||||| || ||| Sbjct 3211 TTCAATCGGCAGCCAACACTGCACAAGATGAGTATGATGGGCCATCGTGTCAAGGTTTTA 3270 Query 305396 TCT-GGATTGACATTTCGATTAAATGTAAGT-GCTTGTACGCCTTATAATGCGGATTTTG 305453 || ||| | |||||||| | ||| ||||| || || |||| ||||| || ||||| | Sbjct 3271 CCTTGGAGT-ACATTTCGTATGAATTTAAGTTGCACGT-CGCCGTATAACGCCGATTTCG 3328 Query 305454 ATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGG 305492 | || |||||||||||| |||| ||||| || |||| || Sbjct 3329 ACGGCGATGAAATGAATCTGCACGTACCACAGTCAATGG 3367 >seq25 Length=1223982 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 305293 TGATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATC 305352 |||||||||| |||||| | || ||| |||||| ||| |||| || || || || || Sbjct 677509 TGATATTGTTGAGAGACATCTCAAGGACGATGATTTGGTGTTGTTTAACAGACAGCCGTC 677568 Query 305353 ACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGA-CATTTC 305411 ||||| ||| | | |||||| || |||| || | || | | | || | |||| Sbjct 677569 GCTGCACAAATTAAGTTTGATGGTACACAAAGCTAAGATCTTG-CAGCACCGAACGTTTC 677627 Query 305412 GATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATA 305471 |||| |||| | | | ||| |||||||| || ||||| || || || |||||||||||| Sbjct 677628 GATTCAATGAATGCGTTTGCACGCCTTACAACGCGGACTTCGACGGCGATGAAATGAATC 677687 Query 305472 TGCATGTACCTCA 305484 | ||| |||| || Sbjct 677688 TTCATTTACCACA 677700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186713109208316