Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq138 127 2e-24 >seq138 Length=435971 Score = 127 bits (140), Expect = 2e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 41007 CGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCCACCTTGT 41066 ||||||||| || ||| |||||||||| ||| | | ||||||||||||||| ||| Sbjct 421460 CGTATAATAATGACCGCTTGGAACCCAATAGACATTCCGAAGATGGCATTGCCACCCTGT 421519 Query 41067 CATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT-CATGTCAATTGTATCAAAG 41125 |||| || |||||||||||| ||||||| ||||||| | || | || |||||||| Sbjct 421520 CATTGTTTCGTTCAGTTTTACGTGAGCAATGGGGAACTGTCCGCGTTACTT-TATCAAAG 421578 Query 41126 ATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTA 41185 | | || ||||| ||||| || ||||||||||||||| ||| | |||| | || Sbjct 421579 AAGCGCCGATATGGGTCTAGGAGTACCGTTTAACATAGCGTCATATTCCTTGCTGATTTA 421638 Query 41186 TATGATTGCACACGTTACCAATTTAAA 41212 ||||| || || || ||| ||| || Sbjct 421639 CATGATCGCTCATGTCACCGGTTTGAA 421665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397424242768780