Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq144 82.4 9e-11 seq60 82.4 9e-11 >seq144 Length=417326 Score = 82.4 bits (90), Expect = 9e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765 || |||||| || |||| ||| ||||||| |||||| | |||||| || || Sbjct 6518 AACGGCGATGGATGCCAAATTGCACACAGCAACTTCATCCGGGCTGGAGTACTCGATGAT 6577 Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825 ||| ||||||||||| | ||||| ||||| | | || |||||||| || || Sbjct 6578 TTCAGTGCACAAGTTACTGCATTTAATCGTGCCTAGATGCTGGTGATTTGATTTCCGATT 6637 Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885 || ||| || ||||||||||| ||||| ||||| ||| ||| || | ||||| || Sbjct 6638 GCAATGATCTTTATAAAGCATGTAAGGCGTTCCCGTTTCCACTTGCGATCTAAGAATGGC 6697 >seq60 Length=814933 Score = 82.4 bits (90), Expect = 9e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765 || |||||| || |||| ||| ||||||| |||||| | |||||| || || Sbjct 812393 AACGGCGATGGATGCCAAATTGCACACAGCAACTTCATCCGGGCTGGAGTACTCGATGAT 812452 Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825 ||| ||||||||||| | ||||| ||||| | | || |||||||| || || Sbjct 812453 TTCAGTGCACAAGTTACTGCATTTAATCGTGCCTAGATGCTGGTGATTTGATTTCCGATT 812512 Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885 || ||| || ||||||||||| ||||| ||||| ||| ||| || | ||||| || Sbjct 812513 GCAATGATCTTTATAAAGCATGTAAGGCGTTCCCGTTTCCACTTGCGATCTAAGAATGGC 812572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618384519235360