Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq592 98.7 1e-15 >seq592 Length=65153 Score = 98.7 bits (108), Expect = 1e-15 Identities = 164/235 (70%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 89163 GATTCAGACGAATGGTTTACATGGAAAGAATTATTCGATCCTGTCTTGCATATAGAACTT 89222 ||| ||| |||||| | | ||| |||| | ||||| || ||||| ||||| || Sbjct 1450 GATACAGTTGAATGGGCTGCCTGGCAAGATCGAGGTGATCCCGTGTTGCACATAGA--TT 1507 Query 89223 AGG--AGGTGGGCTGATATATTTATTATCGCGCCACTAACGGCTAATACTCTAGCGAAGA 89280 || | |||||| || |||||| | || ||||| || || |||||||| | || | Sbjct 1508 TGGTAAAGTGGGCGGACATATTTGTGATAGCGCCGCTGGATGCCAATACTCTGGGCAAAA 1567 Query 89281 TAGCTAATGGTATATGCGACAACTTACTAACTTCTATAGTTAGGGCATGGGATATATCAA 89340 | || | || ||||||||||| | || || | | | | | || |||||| ||| Sbjct 1568 TCGCCAGCGGCATATGCGACAATATCCTCACGTGTGTGGCACGCGCTTGGGATCCTACAA 1627 Query 89341 AGCCCCTTATTTTTTGTCCTGCCATGAATACTCTAATGTGGGAACATCCTATTAC 89395 |||| ||| | || |||||||| ||||| ||| |||||||||||||| || || Sbjct 1628 AGCCGCTTTTGTTCTGTCCTGCTATGAACACTAGGATGTGGGAACATCCGATCAC 1682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603131369333440