Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq144 107 3e-18 seq60 107 3e-18 >seq144 Length=417326 Score = 107 bits (118), Expect = 3e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 76508 GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGA 76567 ||||| ||| |||||||| || |||||||||||||||||||| ||| ||||| ||| Sbjct 6872 GTATACAACTCTTCAAATTTGTCACCCCAAACATCATCCAAACCGGGAGATTCACGAGGA 6931 Query 76568 CACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCAT 76627 ||||||| ||||| |||| | | || |||| |||||| ||||| |||||||| Sbjct 6932 CACATCAGGCTCCACTTCTCATCGTTATATACACGTTCCATAAAAAGATCCGGTATCCAC 6991 Query 76628 AGAGCAATAAATAGATCTCGGG 76649 || ||| ||||| ||||| || Sbjct 6992 AGGGCATAAAATAAATCTCTGG 7013 Score = 102 bits (112), Expect = 1e-16 Identities = 185/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 76973 CTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAAC 77032 |||||||| || |||| | || | || |||||||| || || || ||||||||||| Sbjct 7533 CTAGACATCTGCTGATTATTTGTGCAGGCGTTAAACAACGTTGGCGAAGCATGAGTGAAG 7592 Query 77033 CATTTTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAAT 77091 | || || || ||| ||||| || || ||||| || ||||| || ||||| Sbjct 7593 TAACGCTCGGATAAATAG-TTGTACGTCTCTATAACCCTATCGATATCGTCTTCGTGAAT 7651 Query 77092 TCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTT 77151 | || || || | ||||||||| || ||||||| || || |||| ||| || || Sbjct 7652 AGCAACGGCCACTCTCATCAACATGTGTTGAGGTCTCTCCACTATCTTGCCATTGATCTT 7711 Query 77152 CAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTC 77211 || |||||| | || | ||||| ||||| | || ||||| |||||||| || Sbjct 7712 CAGCAAGTAACTCCTCTCGAGCGTTTTGAAACCGATGTAATTGTAACTGAAGTCTCTGTC 7771 Query 77212 GTAAATAATAACCGAATTTAGTTTGTCC 77239 ||| || ||| |||||| ||| | ||| Sbjct 7772 GTATATTATAGCCGAATCCAGTCTTTCC 7799 >seq60 Length=814933 Score = 107 bits (118), Expect = 3e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 76508 GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGA 76567 ||||| ||| |||||||| || |||||||||||||||||||| ||| ||||| ||| Sbjct 812747 GTATACAACTCTTCAAATTTGTCACCCCAAACATCATCCAAACCGGGAGATTCACGAGGA 812806 Query 76568 CACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCAT 76627 ||||||| ||||| |||| | | || |||| |||||| ||||| |||||||| Sbjct 812807 CACATCAGGCTCCACTTCTCATCGTTATATACACGTTCCATAAAAAGATCCGGTATCCAC 812866 Query 76628 AGAGCAATAAATAGATCTCGGG 76649 || ||| ||||| ||||| || Sbjct 812867 AGGGCATAAAATAAATCTCTGG 812888 Score = 102 bits (112), Expect = 1e-16 Identities = 185/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 76973 CTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAAC 77032 |||||||| || |||| | || | || |||||||| || || || ||||||||||| Sbjct 813408 CTAGACATCTGCTGATTATTTGTGCAGGCGTTAAACAACGTTGGCGAAGCATGAGTGAAG 813467 Query 77033 CATTTTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAAT 77091 | || || || ||| ||||| || || ||||| || ||||| || ||||| Sbjct 813468 TAACGCTCGGATAAATAG-TTGTACGTCTCTATAACCCTATCGATATCGTCTTCGTGAAT 813526 Query 77092 TCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTT 77151 | || || || | ||||||||| || ||||||| || || |||| ||| || || Sbjct 813527 AGCAACGGCCACTCTCATCAACATGTGTTGAGGTCTCTCCACTATCTTGCCATTGATCTT 813586 Query 77152 CAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTC 77211 || |||||| | || | ||||| ||||| | || ||||| |||||||| || Sbjct 813587 CAGCAAGTAACTCCTCTCGAGCGTTTTGAAACCGATGTAATTGTAACTGAAGTCTCTGTC 813646 Query 77212 GTAAATAATAACCGAATTTAGTTTGTCC 77239 ||| || ||| |||||| ||| | ||| Sbjct 813647 GTATATTATAGCCGAATCCAGTCTTTCC 813674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712875975025920