Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq160 102 7e-17 seq150 102 7e-17 >seq160 Length=383029 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| ||||||||||| | |||||||||||||||||| ||||| ||| | | Sbjct 143053 ATGCAAATCTTTGTCAAAACTCTAACCGGCAAAACCATTACCTTGGAAGTCGAAGCGTCC 143112 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || ||| |||||| || || ||||| |||| || || Sbjct 143113 GATACCATTGAAAACGTCAAAGCCAAAATTCAGGATAAGGAAGGAATTCCTCCAGACCAG 143172 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||| | || | ||| || ||||| | ||||| || || | || || ||| Sbjct 143173 CAGAGGTTGATCTTTGCTGGAAAACAGCTCGAAGACGGACGCACATTGTCAGACTACAAT 143232 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 || || |||||||| || |||||||| || | ||||| || ||||||| Sbjct 143233 ATCCAGAAAGAATCAACTCTACATTTGGTACTTCGTCTACGTGGTGGCA 143281 >seq150 Length=403005 Score = 102 bits (112), Expect = 7e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 111193 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111252 |||||||||||| |||| |||||||||| | || || | ||| || ||||| |||||| Sbjct 341915 GACAAAGAAGGCATTCCTCCCGATCAACAACGTCTAATCTTTGCTGGTAAACAGTTGGAA 341974 Query 111253 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111312 ||| | |||| | | ||||| || || || |||||||| |||||||||||||| ||| Sbjct 341975 GATGGAAGAACTCTTTCTGATTACAACATCCAGAAAGAATCCACACTACATTTAGTTTTG 342034 Query 111313 CGTCTGCGCGGTGG 111326 | || || || || Sbjct 342035 AGACTTCGGGGAGG 342048 Score = 82.4 bits (90), Expect = 6e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||| || || ||||| | || || |||||||||||| | ||| || || Sbjct 341403 AATGCAAATCTTCGTGAAAACTCTCACTGGAAAAACCATTACCCTTGAAGTCGAGGCCTC 341462 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 || || | | | |||||| ||||| |||||||||||| |||| |||||| Sbjct 341463 AGACACTATAGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCCGATCA 341522 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||| | || || | ||| || ||||| ||||||||| | ||| | ||||||| || Sbjct 341523 ACAACGTCTAATCTTTGCTGGTAAACAGTTGGAAGATGGAAGAACCCTTTCCGATTACAA 341582 Query 111279 TAT 111281 || Sbjct 341583 CAT 341585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421777496757856