Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq160 170 4e-37 seq239 149 1e-30 seq150 143 6e-29 seq221 89.7 1e-12 seq207 89.7 1e-12 seq182 89.7 1e-12 seq95 89.7 1e-12 seq59 89.7 1e-12 seq57 89.7 1e-12 >seq160 Length=383029 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || |||||||||| ||||| || |||||| |||||||||||||| | Sbjct 144419 CCACCACGTAGACGAAGTACCAAATGTAGAGTTGATTCTTTCTGGATGTTGTAGTCCGAC 144360 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || || || ||||| |||||||| | || || || ||| Sbjct 144359 AGTGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGAGGA 144300 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || || || || || || ||||| || | ||||| |||||||| |||||||| Sbjct 144299 ATTCCTTCTTTATCCTGTATTTTGGCTTTGACATTCTCGATGGTGTCCGACGCTTCGACC 144240 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| || ||||| || | ||||| |||||||| ||||| Sbjct 144239 TCCAGAGTGATGGTTTTACCTGTGAGTGTCTTGACGAATATTTGCAT 144193 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || |||||||||| ||||| || |||||| || |||||||| || | Sbjct 143507 CCACCACGTAGACGAAGTACCAAATGTAGAGTTGATTCTTTCTGTATGTTGTAATCTGAC 143448 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||||| || || || || ||||| || ||||||||||| | || ||||| ||| Sbjct 143447 AATGTGCGTCCGTCTTCGAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGA 143388 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || || |||||||| || || || ||| | || || ||||| || || |||||| Sbjct 143387 ATTCCTTCTTTATCTTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGACGCCTCGACT 143328 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || || || || | ||| || || || |||||||| Sbjct 143327 TCCAGTGTGATTGTTTTGCCGGTGAGAGTTTTGACAAAGATCTGCAT 143281 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| |||| |||||| || ||| |||||||| |||||||| | Sbjct 143735 CCACCACGTAGACGAAGAACCAAATGTAAAGTAGATTCCTTTTGGATATTGTAGTCTGAC 143676 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||||| || || || |||||||| || ||||||||||| | || || || ||| Sbjct 143675 AATGTGCGTCCGTCTTCGAGTTGTTTACCAGCAAAGATCAACCTCTGCTGATCTGGAGGA 143616 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || || |||||||| || || || ||| | || || ||||| || || |||||| Sbjct 143615 ATTCCTTCTTTATCTTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGACGCCTCGACT 143556 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| || || || || | ||| || || || |||||||| Sbjct 143555 TCCAATGTGATTGTTTTGCCGGTTAGAGTTTTGACAAAGATCTGCAT 143509 Score = 140 bits (154), Expect = 7e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| |||| ||| || ||| ||| || ||||||||||| || | Sbjct 143051 CCACCACGTAGACGAAGAACCAAATGCAAAGTGGATTCCTTCTGGATGTTGTAATCTGAC 142992 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||||| || || || || ||||| || ||||||||||| | || ||||| ||| Sbjct 142991 AATGTGCGTCCGTCTTCGAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGA 142932 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||| |||||||| || || || ||| | || || || || || || || ||| Sbjct 142931 ATTCCTTCCTTATCTTGGATTTTAGCCTTGACGTTCTCAATCGTATCAGACGCCTCTACT 142872 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || || ||||| || || | ||||| || || |||||||| Sbjct 142871 TCCAAGGTAATGGTCTTGCCAGTAAGTGTCTTTACAAAAATCTGCAT 142825 Score = 140 bits (154), Expect = 7e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || |||||||||| ||||| || |||||| ||||| |||||||| | Sbjct 143279 CCACCACGTAGACGAAGTACCAAATGTAGAGTTGATTCTTTCTGGATATTGTAGTCTGAC 143220 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||||| || || || || ||||| || ||||||||||| | || ||||| ||| Sbjct 143219 AATGTGCGTCCGTCTTCGAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGA 143160 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||| || || || || ||||| ||| | || || || || || ||||||||| Sbjct 143159 ATTCCTTCCTTATCCTGAATTTTGGCTTTGACGTTTTCAATGGTATCGGACGCTTCGACT 143100 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || || || || || || | ||| || || || || ||||| Sbjct 143099 TCCAAGGTAATGGTTTTGCCGGTTAGAGTTTTGACAAAGATTTGCAT 143053 Score = 131 bits (144), Expect = 4e-25 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| | ||||| |||| ||| | || ||| |||||||| |||||||| | Sbjct 143963 CCNCCACGNANACGAAGAACCAAATGNANAGTNGATTCCTTTTGGATATTGTAGTCTGAC 143904 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||||| || || || || ||||| || ||||||||||| | ||| || || ||| Sbjct 143903 AATGTGCGTCCGTCTTCGAGCTGTTTACCAGCAAAGATCAATCTTTGCTGATCTGGAGGA 143844 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||| || || || || || || ||| | || || ||||| || || |||||| Sbjct 143843 ATTCCTTCCTTATCCTGAATTTTGGCCTTAACGTTCTCAATTGTGTCGGACGCCTCGACT 143784 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| || || || || | ||| || || || |||||||| Sbjct 143783 TCCAATGTGATTGTTTTGCCGGTTAGAGTTTTGACAAAGATCTGCAT 143737 Score = 122 bits (134), Expect = 2e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || | | || | ||| || || ||| || |||||||||||||| | Sbjct 144192 ACCTCCACGAAGCCTCAAGACTAAATGCAAAGTAGATTCCTTCTGGATGTTGTAGTCCGA 144133 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||||| || ||||| || || || ||||| |||||||| | ||| || || || Sbjct 144132 CAATGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAATCTTTGCTGATCTGGAGG 144073 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| || || || || || || ||| | || || ||||| || || ||||| Sbjct 144072 AATTCCTTCCTTATCCTGAATTTTGGCCTTAACGTTCTCAATTGTGTCGGACGCCTCGAC 144013 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||| || || || || | ||| || || || |||||||| Sbjct 144012 TTCCANTGTGATTGTTTTNCCGGTNAGAGTTTTGACNAAGATCTGCAT 143965 >seq239 Length=229837 Score = 149 bits (164), Expect = 1e-30 Identities = 147/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 |||| ||||| |||||||||| || || || |||||||| || || || ||||| |||| Sbjct 6124 CTTTCTGGATATTGTAGTCAGAGAGAGTACGTCCATCCTCCAGCTGCTTGCCGGCGAAGA 6183 Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029 | | ||| || || || || || |||||||||||||| ||||| || || || | | Sbjct 6184 TGAGACGCTGCTGATCCGGTGGGATCCCCTCCTTGTCTTGAATCTTGGCCTTCACATTTT 6243 Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 | |||||||| || ||||| || || || || || ||||||||||| | ||| || |||| Sbjct 6244 CAATAGTGTCGGAGGCTTCCACCTCAAGGGTAATGGTCTTACCCGTGAGAGTTTTCACGA 6303 Query 283090 ATATCTGCAT 283099 |||||||||| Sbjct 6304 ATATCTGCAT 6313 >seq150 Length=403005 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || ||||| | || || || | ||| |||||| ||||||||||| || | | Sbjct 341402 CCTCCTCGAAGGCGCAAAACAAGGTGAAGTGTGGATTCTTTCTGGATGTTGTAATCGGAA 341343 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||||| |||||||| || |||||||| |||||||| || || ||| ||| Sbjct 341342 AGGGTTCTTCCATCTTCTAGTTGCTTACCGGCAAAAATCAAACGCTGCTGATCAGGAGGA 341283 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || ||||| || || || || || || | || || || || |||||||||||| Sbjct 341282 ATTCCTTCTTTGTCCTGAATTTTGGCCTTAACATTTTCTATGGTATCTGAAGCTTCGACT 341223 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| || || || || | ||| || || || |||||||| Sbjct 341222 TCCAAAGTGATGGTTTTCCCAGTAAGAGTTTTTACAAAGATCTGCAT 341176 Score = 127 bits (140), Expect = 4e-24 Identities = 138/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 282918 ATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGT 282977 |||||||| || | ||| || | ||||| || | ||||| || |||||||| | |||| Sbjct 341585 ATGTTGTAATCGGAAAGGGTTCTTCCATCTTCCAACTGTTTACCAGCAAAGATTAGACGT 341526 Query 282978 TGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTG 283037 ||||| || ||||| || || ||||||||||| || |||||||| | || |||||| Sbjct 341525 TGTTGATCGGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCTATAGTG 341466 Query 283038 TCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGC 283097 || || || |||||||| || || || || || || || | ||| || ||||| || ||| Sbjct 341465 TCTGAGGCCTCGACTTCAAGGGTAATGGTTTTTCCAGTGAGAGTTTTCACGAAGATTTGC 341406 Query 283098 ATT 283100 ||| Sbjct 341405 ATT 341403 Score = 107 bits (118), Expect = 4e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955 ||||| ||| |||||| ||||||||||| |||| ||| || | ||||| || | || Sbjct 342025 ATGTAGTGTGGATTCTTTCTGGATGTTGTAATCAGAAAGAGTTCTTCCATCTTCCAACTG 341966 Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 ||| || |||||||| | ||||||||| || ||||| || || |||||||||||||| Sbjct 341965 TTTACCAGCAAAGATTAGACGTTGTTGATCGGGAGGAATGCCTTCTTTGTCTTGGATCTT 341906 Query 283016 TGCTTTTAC 283024 |||||||| Sbjct 341905 AGCTTTTAC 341897 >seq221 Length=261193 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 214240 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 214296 >seq207 Length=283148 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 45076 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 45020 >seq182 Length=331840 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 188071 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 188127 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 188352 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 188296 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 188740 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 188796 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 189008 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 188952 >seq95 Length=602240 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 387883 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 387939 >seq59 Length=817271 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 17136 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 17192 >seq57 Length=840021 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 429188 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 429244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046651275215624