Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq58 104 3e-17 >seq58 Length=824837 Score = 104 bits (114), Expect = 3e-17 Identities = 200/288 (69%), Gaps = 8/288 (3%) Strand=Plus/Plus Query 156164 AAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACC 156223 |||||||| ||||| ||||||||| ||| || || ||||| | || | || ||||| Sbjct 742317 AAACAATCTTCTGATGTTAGCTTCACTTTCTCCAACGTATTTATCCAAAACTTGTGGACC 742376 Query 156224 GTTAACTATTTTGACGGGTCG--TG-ATTTAAAAGCTTGAGCGATACAGCGAGCCATTAA 156280 || || ||||| || || || |||||| | ||| | || ||||||||||| Sbjct 742377 ATTTACAATTTTT--GGCTCCCTTGCATTTAACATCTTTC-CTATTTGCCGAGCCATTAA 742433 Query 156281 TGTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTAA 156340 |||||| ||| ||||||||||| |||| || | |||||||| ||||| || || || Sbjct 742434 TGTTTTTCCGGTACCAGGAGGTCCATATAGTAAAATTCCTTTTACGTGTTTGCATCCCAA 742493 Query 156341 -TTTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAG 156399 | | | | | | |||| | | || || ||||||||||| |||||| Sbjct 742494 CTGGGTGACAACCTCCGTCGGGAAAACA-CGAGATGCGAATGCTCTTCGGAAAATGGCGC 742552 Query 156400 AAAATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATTCCAAT 156447 ||||||||| ||||| || || | |||||||| || || | ||||| Sbjct 742553 TAAATTCTTTGTCCAAACCGCCAATACCCATTTTCTGGAAGTCCCAAT 742600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667020533187360