Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq49536 107 2e-18 >seq49536 Length=2110 Score = 107 bits (118), Expect = 2e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 145680 CTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTC 145739 |||||| ||| ||||||| || ||||| ||| || || || | | ||| | || || Sbjct 1865 CTTCAGCGGCCCCACGTGATTCTTGTAGATGTGAGCATCGCCAATGGTGTGCACAAACTC 1924 Query 145740 CCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTAT 145799 || | || ||||| || |||||||| ||||| ||||||||| ||||||||||| || Sbjct 1925 GCCCGCCTTCAGGCCGCAGACGTGGGCGATCATGTGGGTCAGCAGCGAGTAGCTGGCAAT 1984 Query 145800 GTTGAAGGGCACCCCCAGCCCC 145821 |||||||||||| ||||| ||| Sbjct 1985 GTTGAAGGGCACACCCAGGCCC 2006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589437525546800