Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq40302 430 1e-115
seq22 219 4e-52
seq76387 156 4e-33
seq2574 145 8e-30
seq28390 143 3e-29
seq280 122 9e-23
seq21746 100 3e-16
seq8352 98.7 1e-15
>seq40302
Length=2817
Score = 430 bits (476), Expect = 1e-115
Identities = 574/793 (72%), Gaps = 20/793 (3%)
Strand=Plus/Minus
Query 116615 TTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGG 116674
|||||||| | ||| | ||||| ||| |||||||| |||||||||||| ||||||
Sbjct 2812 TTCCCCATCGAGTACGCCGACATCTGGACGATGTACAAGAAGGCCGAGGCGAGCTTCTGG 2753
Query 116675 ACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGA----GCGCTTGAACGA 116730
||||||||||||||||||||| ||| | ||||| | | ||| | |||
Sbjct 2752 ACCGTCGAGGAGGTGGACCTGAGTCGCGACCTCGCCCACTGGAACGGCGAGCTAAATCGA 2693
Query 116731 CAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGT 116790
||||||||||| || ||| ||||| |||||||| |||||||||||||||||||||||
Sbjct 2692 -AACGAGCGCCACTTTATCTCCCACGTTCTGGCCTTCTTCGCCGCCAGCGACGGCATCGT 2634
Query 116791 CAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTT 116850
||| ||||| || | ||||| ||| | |||||| || ||||||| || |||||
Sbjct 2633 CAATGAGAACCTCGCGGAGCGCTTCATCCGCGAGGTGACCGTCACCGAGGCCCGTTGCTT 2574
Query 116851 CTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGA 116910
||||||||| ||||| ||||| |||||||| |||||||| ||||| || || ||| |
Sbjct 2573 CTACGGCTTCCAGATTGCCATCGAGAACGTCCACTCGGAGATGTACTCCCTGCTGATCAA 2514
Query 116911 CACGTACGT--GCGCTC---TTCGGAG-GAGAAGCTCCGTTTGTTGAACGCCATCGAGAC 116964
||| ||| | ||| | | | | | ||| | ||| || ||||||||| ||||
Sbjct 2513 CACCTACATCAGCGACCGCGTCCAGCGCGAGTACCTC------TTCAACGCCATCCAGAC 2460
Query 116965 GATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGC 117024
|||||| |||||| ||||||| ||||||| || ||||| |||| | | | |
Sbjct 2459 GATGCCCTGCGTCGCGAAGAAGGCGAAGTGGGCCATGGCCTGGACGGCCGCCGAAAACGG 2400
Query 117025 CGCC---TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGG 117081
|||| || | ||||||||| || |||||||| ||||| |||||| ||||||| ||
Sbjct 2399 CGCCACCTTTGCCGAGCGCCTCGTCGCCTTCGCCGCCGTGGAGGGCATCTTCTTCAGCGG 2340
Query 117082 CAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAG 117141
| || ||| ||| |||||||| ||||| |||||||| ||||| |||||||| |||||
Sbjct 2339 CTCCTTTGCCAGCATCTTTTGGCTGAAGAAGCGCGGCCTGATGCCGGGCCTGACCTTCAG 2280
Query 117142 CAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAA 117201
||| ||||| ||| | | |||||||| ||||| ||||||||||||||| | || ||
Sbjct 2279 CAATGAGCTGATCAGCCGCGACGAGGGCCTGCACTGCGACTTTGCCTGTCTCCTCTTTCG 2220
Query 117202 GCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGC 117261
|| || | || ||| || | ||| || | ||||| ||| ||| || |||
Sbjct 2219 CCACCTGATTAAGAAGCCGTACGATGAGCGGGTGGTGCAGATCATCAACGAGGCCGTCCG 2160
Query 117262 CATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGA 117321
|||||||||| |||||||| || || || ||||| || | || | || |||
Sbjct 2159 CATCGAGCAGGAGTTCCTCACTGACGCCCTTCCGGTCGCCCTCATTGGCATGAACAACGA 2100
Query 117322 AACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGC 117381
|||||| ||||| |||| | ||||||| |||||||| | ||||| | || |
Sbjct 2099 GCTGATGTCCACGTACATTGAGTACTGCGCCGACCGGCTGCTGGTGGAGCTCGGCGTGCC 2040
Query 117382 CAAGCACTACAAC 117394
|||| ||||||||
Sbjct 2039 CAAGTACTACAAC 2027
>seq22
Length=933496
Score = 219 bits (242), Expect = 4e-52
Identities = 381/552 (69%), Gaps = 14/552 (3%)
Strand=Plus/Plus
Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714
|||| || || || |||||||| || || ||||| ||||| ||||| || | | || |
Sbjct 329099 AGGCAGAAGCATCCTTCTGGACGGTGGAAGAGGTTGACCTTTCCAAAGATATGGATGATT 329158
Query 116715 GGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCG 116774
||| ||| | | |||||| || ||||||||||| |||||| |||| || || ||||
Sbjct 329159 GGGCGCGTCTCACCGACAATGAACGCCATTTCATTTCGCACGTTTTGGCATTCTTTGCCG 329218
Query 116775 CCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGG 116834
|| ||| || || || || || || | || || || ||| || || || || |
Sbjct 329219 CCTCCGATGGTATTGTGAATGAAAACTTAGTTGAACGCTTCAGCCAAGAAGTTCAAATCA 329278
Query 116835 CCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGT 116894
| |||||||| |||||||| || ||||| |||||||||||||| ||||| || |||||||
Sbjct 329279 CAGAGGCGCGTTGCTTCTATGGATTTCAAATCGCCATGGAGAATGTGCATTCTGAAATGT 329338
Query 116895 ATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCG------TTTGT 116948
| | | || || || || | | ||| | |||| | ||||
Sbjct 329339 ACAGCATATTAATTGATACATATAT------TAAGGATGGCAAGCAAAGGGATTACTTGT 329392
Query 116949 TGAACGCCATCGAGACGATGCCGTGC-GTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGG 117007
| || || || ||||||||||| ||| || || ||||| || ||||| ||| |||
Sbjct 329393 TCAATGCTATTGAGACGATGCC-TGCTGTTAAGCGCAAGGCTGATTGGGCACTGGCGTGG 329451
Query 117008 ATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGC 117067
|| | | | |||| ||| ||||| || | | || || || || || || |||
Sbjct 329452 ATTTCATCGAAATCGGCCAACTTTGGCGAACGTATAATAGCATTTGCCGCGGTTGAAGGC 329511
Query 117068 GTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCC 117127
| |||||| |||||||| || | || |||||||| |||||||| ||||| |||||
Sbjct 329512 ATTTTCTTTAGTGGCAGTTTTGCTTCAATCTTTTGGCTGAAGAAACGGGGCCTAATGCCT 329571
Query 117128 GGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCC 117187
|| |||| ||| || ||||| || || |||||||| || | |||||||| |||||
Sbjct 329572 GGTTTGACATTCTCTAATGAGCTAATTTCAAGGGACGAAGGATTACATTGCGATTTTGCT 329631
Query 117188 TGTTTGCTGTTC 117199
|| || |||||
Sbjct 329632 TGCCTGATGTTC 329643
>seq76387
Length=1185
Score = 156 bits (172), Expect = 4e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| || ||||| |||| || || ||| |
Sbjct 415 ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTGGAGCCCAGC 356
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | |||| || || | ||||| |||||||| ||| ||||||||
Sbjct 355 GACACCATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAG 296
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||||||||| ||||| || |||| |||||||||| |||||||||
Sbjct 295 CAGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGGCGCACCCTCTCGGACTACAAC 236
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920
||||| |||||| |||| || || || || | || || | |||||| ||
Sbjct 235 ATCCAAAAGGAGTCCACCCTCCACCTGGTCCTTCGTCTGCGCGGCGGCAGC 185
Score = 149 bits (164), Expect = 6e-31
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| ||||| ||||||||| |||| || || ||| |
Sbjct 988 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGCCCAGC 929
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | |||| || || | ||||| |||||||||||| ||||||||
Sbjct 928 GATACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 869
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| ||| || || ||||| || |||| ||||||||| || ||||||
Sbjct 868 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGACGGTCGCACCCTCTCGGATTACAAC 809
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| |||| || || || |||
Sbjct 808 ATCCAGAAGGAGTCCACCCTTCACCTGGTG 779
Score = 140 bits (154), Expect = 3e-28
Identities = 145/190 (76%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| || ||||| |||| || || ||| |
Sbjct 760 ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTGGAGCCCAGC 701
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | |||| || || | ||||| |||||||| ||| ||||||||
Sbjct 700 GACACCATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAG 641
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| ||| ||||| || || || |||| |||||||||| ||||||||||
Sbjct 640 CAGCGTCTCATCTTCGCTGGCAAGCAACTCGAGGACGGTCGCACCCTCAGCGACTACAAC 581
Query 40870 ATCCAGAAGG 40879
||||| ||||
Sbjct 580 ATCCAAAAGG 571
Score = 102 bits (112), Expect = 8e-17
Identities = 79/94 (84%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 40786 AAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGAC 40845
|| ||||||||||| |||||||||| |||||||||| ||| ||||| ||||| || |||
Sbjct 1185 AAGGAGGGCATCCCTCCGGACCAGCAGCGACTCATCTTCGCTGGCAAGCAGCTCGAGGAC 1126
Query 40846 GAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879
| ||||| || | ||||||||||||||| ||||
Sbjct 1125 GGTCGCACTCTGAGCGACTACAACATCCAAAAGG 1092
>seq2574
Length=80092
Score = 145 bits (160), Expect = 8e-30
Identities = 148/193 (77%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || ||||||||||| ||||||||| |||| || || ||
Sbjct 59052 AAGATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGCCC 58993
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| ||||| | | | | | |||| || || | ||||| ||||||||||| | |||
Sbjct 58992 AGCGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGAC 58933
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| ||||| |||| ||| ||||| ||||| || |||| || || || | |||||||
Sbjct 58932 CAGCAGCGACTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACGCTGAGCGACTAC 58873
Query 40867 AACATCCAGAAGG 40879
|||||||||||||
Sbjct 58872 AACATCCAGAAGG 58860
>seq28390
Length=4902
Score = 143 bits (158), Expect = 3e-29
Identities = 156/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||| |||||||| || || || || ||||||||||| ||||||||| |||| ||||| |
Sbjct 304 AAACATGCAAATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGCC 363
Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| | || | | | | | |||| ||| || | ||||| ||||||||||| | ||
Sbjct 364 CTCTGATACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATCCCTCCCGA 423
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| || ||||||| ||| || |||||||| || |||| |||||||| |||||
Sbjct 424 CCAGCAGCGTCTCATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACCCTTTCGGACTA 483
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCA 40892
||| |||||||||||| | || || ||
Sbjct 484 CAATATCCAGAAGGAGTCGACCCTCCA 510
>seq280
Length=341618
Score = 122 bits (134), Expect = 9e-23
Identities = 161/218 (74%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA- 40747
||||||||| ||||| || || || || |||||||| || ||| | || || || ||||
Sbjct 105568 AATGCAAATCTTCGTGAAGACCCTGACTGGCAAAACTATAACCTTGGAGGTTGA-GCCAT 105510
Query 40748 CCGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | | | ||||| |||||| || |||| ||||| || || || || | |||
Sbjct 105509 CCGACACCATTGAAAACG-TCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGAC 105451
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|||||||| | || | || || || ||||| || |||| ||||||| | ||||||
Sbjct 105450 CAGCAACGTTTGATTTTTGCTGGTAAGCAGCTCGAAGACGGGCGCACCTTGTCGGACTAC 105391
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||||| |||||| | || || ||| | || ||||
Sbjct 105390 AACATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCG 105353
Score = 113 bits (124), Expect = 5e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || || |||||||||||| | || || || | |
Sbjct 105339 ATGCAAATCTTCGTGAAGACCCTAACTGGTAAAACCATCACCTTGGAGGTTGAGCCGTCA 105280
Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | ||||| |||||| || |||| || ||||| ||||| || | || ||
Sbjct 105279 GACACCATCGAAAACG-TCAAGGCCAAGATTCAAGATAAAGAAGGCATTCCTCCAGATCA 105221
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||||| | || | ||| || ||||| |||| |||| |||||| | ||||||||
Sbjct 105220 ACAACGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGCCGCACCTTGTCGGACTACAA 105161
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||| |||||| | || || ||| | || ||||
Sbjct 105160 CATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCG 105125
Score = 109 bits (120), Expect = 6e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
|||||||||||| ||||| || || | || ||||| |||||||| | || || ||| |
Sbjct 106711 AAAAATGCAAATCTTCGTGAAGACTTTGACTGGCAAGACCATCACTCTGGAGGTTGAACC 106652
Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|||| | | | | | || | || |||| ||||||||||| || || | ||
Sbjct 106651 ATCCGATACTATTGAGAATGTAAAAGCCAAGATTCAAGACAAAGAGGGTATTCCACCAGA 106592
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||||| | |||| || |||||||| |||| |||| |||||| | ||| ||
Sbjct 106591 TCAGCAACGTTTAATCTTTGCCGGCAAACAATTGGAAGACGGACGCACCTTGTCCGATTA 106532
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||| |||||| | || || ||||| ||
Sbjct 106531 CAACATCCAAAAGGAGTCTACACTTCATCTGGT 106499
Score = 109 bits (120), Expect = 6e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
|||||||||||| ||||| || || | || ||||| |||||||| | || || ||| |
Sbjct 114957 AAAAATGCAAATCTTCGTGAAGACTTTGACTGGCAAGACCATCACTCTGGAGGTTGAACC 114898
Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|||| | | | | | || | || |||| ||||||||||| || || | ||
Sbjct 114897 ATCCGATACTATTGAGAATGTAAAAGCCAAGATTCAAGACAAAGAGGGTATTCCACCAGA 114838
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||||| | |||| || |||||||| |||| |||| |||||| | ||| ||
Sbjct 114837 TCAGCAACGTTTAATCTTTGCCGGCAAACAATTGGAAGACGGACGCACCTTGTCCGATTA 114778
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||| |||||| | || || ||||| ||
Sbjct 114777 CAACATCCAAAAGGAGTCTACACTTCATCTGGT 114745
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || |||||||| |||||| | || || || |||| |
Sbjct 106023 ATGCAAATCTTCGTGAAGACCCTAACTGGCAAAACTATCACCTTGGAGGTTGA-GCCATC 105965
Query 40750 -GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | ||| | || | || || | || || || || || ||| | || ||
Sbjct 105964 AGACACCATCGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCA 105905
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || | |||| ||| ||||||||||| || || | |||||| | ||||||||
Sbjct 105904 GCAGCGTTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACCTTGTCTGACTACAA 105845
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||| |||||| | || |||||| | || ||||
Sbjct 105844 CATCCAAAAGGAGTCTACTCTGCATTTGGTCCTGCG 105809
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || |||||||| |||||| | || || || |||| |
Sbjct 114269 ATGCAAATCTTCGTGAAGACCCTAACTGGCAAAACTATCACCTTGGAGGTTGA-GCCATC 114211
Query 40750 -GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | ||| | || | || || | || || || || || ||| | || ||
Sbjct 114210 AGACACCATCGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCA 114151
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || | |||| ||| ||||||||||| || || | |||||| | ||||||||
Sbjct 114150 GCAGCGTTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACCTTGTCTGACTACAA 114091
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||| |||||| | || |||||| | || ||||
Sbjct 114090 CATCCAAAAGGAGTCTACTCTGCATTTGGTCCTGCG 114055
Score = 104 bits (114), Expect = 2e-17
Identities = 149/205 (73%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748
||||| ||||| || || || || || || ||||||||||| | || || || |||| |
Sbjct 105795 ATGCAGATATTTGTGAAGACCCTAACTGGTAAAACCATCACGTTGGAGGTTGA-GCCATC 105737
Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
||||| | | | |||| |||| | || || | ||||| ||||| || || | || |
Sbjct 105736 CGACACCATTGAGAACG-TCAAAGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATC 105678
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||| || | |||| ||| ||||| || || || || | |||||| | ||||||||
Sbjct 105677 AGCAGCGTTTAATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACCTTGTCCGACTACA 105618
Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892
||||||| |||||| | ||||| ||
Sbjct 105617 ACATCCAAAAGGAGTCTACGCTCCA 105593
Score = 104 bits (114), Expect = 2e-17
Identities = 149/205 (73%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748
||||| ||||| || || || || || || ||||||||||| | || || || |||| |
Sbjct 114041 ATGCAGATATTTGTGAAGACCCTAACTGGTAAAACCATCACGTTGGAGGTTGA-GCCATC 113983
Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
||||| | | | |||| |||| | || || | ||||| ||||| || || | || |
Sbjct 113982 CGACACCATTGAGAACG-TCAAAGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATC 113924
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||| || | |||| ||| ||||| || || || || | |||||| | ||||||||
Sbjct 113923 AGCAGCGTTTAATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACCTTGTCCGACTACA 113864
Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892
||||||| |||||| | ||||| ||
Sbjct 113863 ACATCCAAAAGGAGTCTACGCTCCA 113839
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||||||||||||| | || || || | |
Sbjct 105111 ATGCAAATTTTCGTCAAGACTCTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCGTCA 105052
Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| || || | |||||||| || ||||| | || ||
Sbjct 105051 GACACCATCGAGAACG-TTAAGGCCAAGATCCAGGACAAAGAAGGTATCCCACCAGATCA 104993
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || | |||| ||| ||||| ||||| || || | || || | ||| || ||
Sbjct 104992 ACAGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGTACTTTGTCCGATTATAA 104933
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||| |||||| | || || ||| | || ||||
Sbjct 104932 CATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCG 104897
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| | ||||| ||||||||||| | || || || | ||
Sbjct 106479 ATGCAGATTTTCGTCAAAACTTTGACGGGTAAAACCATCACTTTGGAGGTTGAGCCTTCC 106420
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | |||| | ||||||| || || || || ||||| | || ||
Sbjct 106419 GATACCATTGAGAATGTCAAAGCTAAAATTCAGGATAAGGAAGGAATCCCACCAGATCAA 106360
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| | || | ||| ||||| ||| |||| || | ||||| | ||||||||
Sbjct 106359 CAACGTTTAATTTTCGCTGGCAAGCAGTTGGAGGATGGACGCACATTGTCTGACTACAAT 106300
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
|| |||||||| | || ||||| |||| ||||||
Sbjct 106299 ATTCAGAAGGAATCTACATTGCATTTAGTTTTGCGC 106264
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| | ||||| ||||||||||| | || || || | ||
Sbjct 114725 ATGCAGATTTTCGTCAAAACTTTGACGGGTAAAACCATCACTTTGGAGGTTGAGCCTTCC 114666
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | |||| | ||||||| || || || || ||||| | || ||
Sbjct 114665 GATACCATTGAGAATGTCAAAGCTAAAATTCAGGATAAGGAAGGAATCCCACCAGATCAA 114606
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| | || | ||| ||||| ||| |||| || | ||||| | ||||||||
Sbjct 114605 CAACGTTTAATTTTCGCTGGCAAGCAGTTGGAGGATGGACGCACATTGTCTGACTACAAT 114546
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
|| |||||||| | || ||||| |||| ||||||
Sbjct 114545 ATTCAGAAGGAATCTACATTGCATTTAGTTTTGCGC 114510
Score = 91.5 bits (100), Expect = 2e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||||||||| || ||||| | || |||||||||||||| | || || ||| | ||
Sbjct 106251 ATGCAAATATTTGTTAAAACATTGACTGGCAAAACCATCACTCTGGAGGTTGAACCTTCC 106192
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | ||| | || | ||||| | || || || || ||||| | || ||
Sbjct 106191 GATACTATCGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAA 106132
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| ||||| ||||| || || | |||||| | ||| || |||
Sbjct 106131 CAGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCTTGTCCGATTATAAC 106072
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|| || || ||| | || |||||| |||| ||||
Sbjct 106071 ATACAAAAAGAGTCTACCCTGCATTTAGTCCTGCG 106037
Score = 91.5 bits (100), Expect = 2e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||||||||| || ||||| | || |||||||||||||| | || || ||| | ||
Sbjct 114497 ATGCAAATATTTGTTAAAACATTGACTGGCAAAACCATCACTCTGGAGGTTGAACCTTCC 114438
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | ||| | || | ||||| | || || || || ||||| | || ||
Sbjct 114437 GATACTATCGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAA 114378
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| ||||| ||||| || || | |||||| | ||| || |||
Sbjct 114377 CAGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCTTGTCCGATTATAAC 114318
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|| || || ||| | || |||||| |||| ||||
Sbjct 114317 ATACAAAAAGAGTCTACCCTGCATTTAGTCCTGCG 114283
Score = 86.0 bits (94), Expect = 6e-12
Identities = 118/160 (74%), Gaps = 4/160 (3%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA- 40747
||||||||| ||||| || || || || |||||||| || ||| | || || || ||||
Sbjct 113814 AATGCAAATCTTCGTGAAGACCCTGACTGGCAAAACTATAACCTTGGAGGTTGA-GCCAT 113756
Query 40748 CCGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | | | ||||| |||||| || |||| ||||| || || || || | |||
Sbjct 113755 CCGACACCATTGAAAACG-TCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGAC 113697
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACG 40846
|||||||| | || | || || || ||||| || ||||
Sbjct 113696 CAGCAACGTTTGATTTTTGCTGGTAAGCAGCTCGAAGACG 113657
>seq21746
Length=7614
Score = 100 bits (110), Expect = 3e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||||||| || ||||| ||||| || |||||||| |||||||| | || ||||| |
Sbjct 2193 AAAATGCAGATTTTCGTCAAAACACTTACGGGCAAGACCATCACTTTGGAGGTCGAGCCT 2252
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | ||| |||||| ||||| | || ||||| || || || | ||
Sbjct 2253 TCTGACACTATCGAAAATGTCAAGGCTAAAATCCAAGATAAAGAAGGTATACCACCAGAT 2312
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|| ||||| | || | ||| ||||| || |||| || | || || | |||||||
Sbjct 2313 CAACAACGTTTGATTTTCGCCGGCAAGCAATTGGAAGATGGTCGTACTTTGTCCGACTAC 2372
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||| || |||||| | || || || | ||||||||
Sbjct 2373 AACATTCAAAAGGAGTCAACCCTCCACTTGGTGTTGCG 2410
>seq8352
Length=27642
Score = 98.7 bits (108), Expect = 1e-15
Identities = 130/177 (73%), Gaps = 10/177 (6%)
Strand=Plus/Plus
Query 139349 GGCTACGTGCTCGGCCTGCCGCGCGGCCTGCACGGCTTCCACGTGCACGAGTTCGGCGAC 139408
||| | |||| ||||||| ||| ||| |||||| || ||||| ||| |||||||||||
Sbjct 21153 GGCGAGGTGCGCGGCCTGACGCCGGGCAAGCACGGTTTTCACGTCCACCAGTTCGGCGAC 21212
Query 139409 GCGAGCAACGGGTGCACGTCGGC--CGGCGAGCACTTCAACCCCGCGCGCCGGGACCACG 139466
| |||| ||||| | || ||| ||||| ||||||||| | | |||||
Sbjct 21213 ACCTCGGACGGCTGCAC--CAGCATGGGCCCGCACTACAACCCCGCCGGACACAGCCACG 21270
Query 139467 GCGCGCCC---GACGCCGAGATCAGGCACGTCGGCGACCTGGGCAACCTCGAGTCGG 139520
| |||||| ||||||| | | ||||||||||||||||||||| ||||| |||
Sbjct 21271 GGGCGCCCGGAGACGCCG---CCCGACACGTCGGCGACCTGGGCAACATCGAGGCGG 21324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514661024399200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |