Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq81517 143 2e-29
>seq81517
Length=1088
Score = 143 bits (158), Expect = 2e-29
Identities = 352/523 (67%), Gaps = 8/523 (2%)
Strand=Plus/Plus
Query 97002 TAGTGTTGGGAAA-GGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGAT 97060
|||| |||||||| || | ||| | || | | ||| ||| | | | ||||| ||||
Sbjct 432 TAGT-TTGGGAAATGGACGGGGTTTACGTGCTATCTGTTCTTTTAAGGGTTCAATATGAT 490
Query 97061 TCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAG-TG 97119
| ||| | || ||||| || | |||||| | |||||||| ||| | || || | |
Sbjct 491 TGTTATAGACATGGGCATCACCAAGAGTGTGCACGAATTCTCCGGGA-CGAAGTCCGGTC 549
Query 97120 ACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGT 97179
|| || || |||||| | ||||| | || ||| || || || || ||||| || | |
Sbjct 550 ACGTGTGCAATCATATATGTTAACAAAGCATAAGAGGCGATATTGAATGGCACGCCCAAT 609
Query 97180 CCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAAC 97239
||||| ||||| | |||||| |||||||| || |||| |||| || ||||
Sbjct 610 CCCATGTCAGCGCTACGTTGATACAACTGACAAGACAGCTCACCATTTGCAACGAAAAAT 669
Query 97240 TGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGC 97298
|| | | ||| ||||| || || | ||||||| |||| || | | |||||| ||
Sbjct 670 TGTG-CTAGACAATGACAAGGAGGTAGTGCCATTTGCGGAATGTCAAGGGGATTCCACGC 728
Query 97299 ACACATCAACATTCTTCTATCGGTTGGGTTTGTGT-GTATGGTATTAATTATCTGCTTTA 97357
| |||| | || | | ||| || ||||||| | | || |||| ||||| | | |
Sbjct 729 AGACATTATTATGCGACGATCA-TTCGGTTTGTTTCGGATTGTATCAATTACATTTTGAA 787
Query 97358 ATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAAT 97417
|||||| |||||||| || ||||| | || | |||||| ||||||||||
Sbjct 788 GTTGATCTACGCCTTCACCCGAGTAATTATCGTTGCATGTTCGATATTTGGCTCCAAAAT 847
Query 97418 GCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAA 97477
| | ||| || |||||||| || || || | || |||||||| | || | ||||||
Sbjct 848 GGCGCCACTGAAATCCATACACGGGGCCCAAATCACCTTCTTCGCGATTATGAAAACCAC 907
Query 97478 GCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTG 97520
||||| ||| | | || | ||| | |||||||||||
Sbjct 908 ATTTATCCAAAAACTCTCGAGTACTATTCCCGTCCCAAATGTG 950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346417695311900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |