Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq180 104 4e-17
>seq180
Length=417715
Score = 104 bits (114), Expect = 4e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 189419 CAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTG 189478
||| |||| | || | || || ||| ||| ||||| ||| |||| | || |||
Sbjct 110271 CAATTCGAGCAGGCCCACACACACGATGATCTTTGGAATGCGGCACAGGTTCAATTGGCA 110330
Query 189479 AGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGG 189538
| ||||| ||||||||| ||||| |||| ||||| ||||| || |||||||||||||||
Sbjct 110331 AATGAAGGCAAAATGCATGGTTTTCTACGCATGTACTGGGCAAAAAAGATACTTGAATGG 110390
Query 189539 ACTAGAACACCTGAAGACGCTTTGAGTTATAG-TATCTATTTGAACAACAAGTACGAACT 189597
| || || ||| | || || || || | |||||| ||||| |||| ||| |
Sbjct 110391 GCCGCTACGCCGGAACAAGCCTT-AGAAATTGCTATCTACTTGAATGACAAATACAGTTT 110449
Query 189598 AGACGGCACGGATCCTAACGGATACGTAGGT 189628
||| || |||||| ||||| || ||||||
Sbjct 110450 AGATGGACGGGATCCAAACGGCTATGTAGGT 110480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922196631666800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |