Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq76387 129 7e-25
seq28390 129 7e-25
seq2574 123 3e-23
seq1553 107 2e-18
seq1458 105 8e-18
seq16945 104 3e-17
seq280 100 3e-16
seq2405 98.7 1e-15
seq731 98.7 1e-15
seq989 95.1 1e-14
seq257 93.3 5e-14
seq182 93.3 5e-14
seq13719 91.5 2e-13
seq10163 91.5 2e-13
seq5397 89.7 6e-13
seq3099 89.7 6e-13
>seq76387
Length=1185
Score = 129 bits (142), Expect = 7e-25
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| | ||||| || | ||| |||||| || || |||||||| | || || || |
Sbjct 773 ACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGACC 832
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || |||||||| |||||||| ||||| ||||||||||| | || | || ||||||
Sbjct 833 GTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTT 892
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
|||| ||| || || | || | | || ||||| | ||||| |||| |||||
Sbjct 893 GTCCTGGATCTTCGCCTTCACATTCTCGATGGTATCGCTGGGCTCCACCTCGAGGGTGAT 952
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| ||||| || || ||||| |||||||| |||||
Sbjct 953 GGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 988
Score = 113 bits (124), Expect = 5e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||||||||| || ||||| || | || || ||| |||| || |||||||| || |||||
Sbjct 224 CTCCTTTTGGATGTTGTAGTCCGAGAGGGTGCGCCCGTCCTCGAGCTGCTTGCCCGCGAA 283
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | || ||||||||| ||| || || | |
Sbjct 284 GATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATT 343
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | | |||||||| | ||||| |||| ||||| || ||||| || || ||||| ||
Sbjct 344 CTCAATGGTGTCGCTGGGCTCCACCTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTAAC 403
Query 43172 AAAGATTTGCAT 43183
||||| |||||
Sbjct 404 GAAGATCTGCAT 415
Score = 104 bits (114), Expect = 3e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
||||||| || ||||| || || || || |||| || || ||||| |||||||| |
Sbjct 571 CCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCCTCGAGTTGCTTGCCAGCGAAGA 630
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
|||| ||||||||||| | || | || ||||||||| ||| || || | ||
Sbjct 631 TGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCT 690
Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173
| | |||||||| | ||||| |||| ||||| || ||||| || || ||||| || |
Sbjct 691 CAATGGTGTCGCTGGGCTCCACCTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTAACGA 750
Query 43174 AGATTTGCAT 43183
|||| |||||
Sbjct 751 AGATCTGCAT 760
Score = 84.2 bits (92), Expect = 2e-11
Identities = 75/94 (80%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
||||||| || ||||| || |||||| || |||| || |||||||| |||||||| |
Sbjct 1092 CCTTTTGGATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGA 1151
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|||||||||||||||| | || | || ||||||
Sbjct 1152 TGAGTCGCTGCTGGTCCGGAGGGATGCCCTCCTT 1185
>seq28390
Length=4902
Score = 129 bits (142), Expect = 7e-25
Identities = 146/196 (74%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || |||||||| || | || || || |||| || ||||| ||||| |||||
Sbjct 499 CTCCTTCTGGATATTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAA 440
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||||||||||| || | || |||||||||| ||| ||| || | |
Sbjct 439 GATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATT 380
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | | ||| || | || || |||| |||||||| |||||||| || ||||| ||
Sbjct 379 CTCGATCGTATCAGAGGGCTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCAC 320
Query 43172 AAAGATTTGCATTTTT 43187
|||||||||||| |||
Sbjct 319 AAAGATTTGCATGTTT 304
>seq2574
Length=80092
Score = 123 bits (136), Expect = 3e-23
Identities = 143/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || ||| || || |||| || |||||||| || ||||| |
Sbjct 58860 CCTTCTGGATGTTGTAGTCGCTCAGCGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 58919
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| |||||||||||||| | ||| | || |||||||||| ||| || || | ||
Sbjct 58920 TCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCT 58979
Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173
| | |||||||| | ||||| |||| |||||||| |||||||| || ||||| || |
Sbjct 58980 CGATGGTGTCGCTGGGCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 59039
Query 43174 AGATTTGCATTTT 43186
|||| ||||| ||
Sbjct 59040 AGATCTGCATCTT 59052
>seq1553
Length=119033
Score = 107 bits (118), Expect = 2e-18
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 100440 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 100499
Query 60124 TATACTACCGAGGA 60137
||||||||||||||
Sbjct 100500 TATACTACCGAGGA 100513
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 100026 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 100085
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 100086 TACTACCGAGGA 100097
>seq1458
Length=125940
Score = 105 bits (116), Expect = 8e-18
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand=Plus/Plus
Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115
|||||| | | ||| |||| ||||||||||||| ||||||||||||||||||||| |||
Sbjct 24163 AAAAATATACCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 24222
Query 60116 CTCACCACTATACTACCGAGGATTG 60140
|| ||||||||||||||||||| ||
Sbjct 24223 CTGACCACTATACTACCGAGGACTG 24247
Score = 95.1 bits (104), Expect = 1e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 85163 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 85104
Query 60126 TACTACCGAGGATTG 60140
||||| |||||||||
Sbjct 85103 TACTATCGAGGATTG 85089
>seq16945
Length=11338
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 569 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 628
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 629 TACTACCGAGGA 640
Score = 104 bits (114), Expect = 3e-17
Identities = 68/74 (92%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 944 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGG-GATACTGACCAC 1002
Query 60124 TATACTACCGAGGA 60137
||||||||||||||
Sbjct 1003 TATACTACCGAGGA 1016
>seq280
Length=341618
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||| | | ||||| ||||| || | || ||||||||| || ||||| || |
Sbjct 105568 TCCTCCGCGCAGACGCAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGA 105627
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| || || | || || || ||||| || ||||| || | |||||||| || | ||
Sbjct 105628 CAAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGAGG 105687
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | |||||||||| ||| || ||||| || | | |||||| | || ||
Sbjct 105688 AATACCCTCCTTGTCCTGGATCTTAGCTTTGACGTTCTCAATGGTGTCGGATGGCTCAAC 105747
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||||||| || ||||| ||||| ||||| || |||||
Sbjct 105748 CTCCAACGTGATGGTTTTACCAGTTAGGGTCTTCACAAATATCTGCAT 105795
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||| | | ||||| ||||| || | || ||||||||| || ||||| || |
Sbjct 113814 TCCTCCGCGCAGACGCAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGA 113873
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| || || | || || || ||||| || ||||| || | |||||||| || | ||
Sbjct 113874 CAAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGAGG 113933
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | |||||||||| ||| || ||||| || | | |||||| | || ||
Sbjct 113934 AATACCCTCCTTGTCCTGGATCTTAGCTTTGACGTTCTCAATGGTGTCGGATGGCTCAAC 113993
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||||||| || ||||| ||||| ||||| || |||||
Sbjct 113994 CTCCAACGTGATGGTTTTACCAGTTAGGGTCTTCACAAATATCTGCAT 114041
Score = 93.3 bits (102), Expect = 5e-14
Identities = 153/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| |||||||| | || ||||||||| || ||||| || | || || ||| |
Sbjct 105352 ACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCCGACAAGGTGCGCCC 105411
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || |||||||||||||| || || | || |||||||| | || | | |||||
Sbjct 105412 GTCTTCGAGCTGCTTACCAGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCCTT 105471
Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146
|| | ||| | || | |||| | | | |||||| | || || || | || |
Sbjct 105472 GT-CTTGAATCTTGGCCTTGACGTTTTCAATGGTGTCGGATGGCTCAACCTCCAAGGTTA 105530
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
| |||||||| || || ||||| || ||||||||||||
Sbjct 105531 TAGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCATT 105568
Score = 89.7 bits (98), Expect = 6e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| | || ||||| || ||||||||||| ||||| ||||||||||| |||| |
Sbjct 106253 CCTCCACGTAGGCGCAAAACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGAC 106312
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
| || || | || || | |||||| |||||||| || | || || || || | ||
Sbjct 106313 AATGTGCGTCCATCCTCCAACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGG 106372
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | ||||| ||| ||| |||| | ||||| || | | || ||| | || ||
Sbjct 106373 ATTCCTTCCTTATCC-TGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAAC 106431
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | ||||||||||| ||||| | || || || || || |||||
Sbjct 106432 CTCCAAAGTGATGGTTTTACCCGTCAAAGTTTTGACGAAAATCTGCAT 106479
Score = 89.7 bits (98), Expect = 6e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| | || ||||| || ||||||||||| ||||| ||||||||||| |||| |
Sbjct 114499 CCTCCACGTAGGCGCAAAACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGAC 114558
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
| || || | || || | |||||| |||||||| || | || || || || | ||
Sbjct 114559 AATGTGCGTCCATCCTCCAACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGG 114618
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | ||||| ||| ||| |||| | ||||| || | | || ||| | || ||
Sbjct 114619 ATTCCTTCCTTATCC-TGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAAC 114677
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | ||||||||||| ||||| | || || || || || |||||
Sbjct 114678 CTCCAAAGTGATGGTTTTACCCGTCAAAGTTTTGACGAAAATCTGCAT 114725
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| |||||||| | || ||||||||| || || ||||| | || ||| || |
Sbjct 104896 ACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTATAATCGGACAAAGTACGGCC 104955
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || |||||||| || ||||| || | ||||| || || | || | | || ||
Sbjct 104956 ATCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGGATACCTTCTTT 105015
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
|||| ||| || || | || | | ||||| || || || || | |||||
Sbjct 105016 GTCCTGGATCTTGGCCTTAACGTTCTCGATGGTGTCTGACGGCTCAACCTCCAAGGTGAT 105075
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||||||| || || ||||| || || ||||||||
Sbjct 105076 GGTTTTGCCAGTCAGAGTCTTGACGAAAATTTGCAT 105111
>seq2405
Length=84500
Score = 98.7 bits (108), Expect = 1e-15
Identities = 72/83 (87%), Gaps = 2/83 (2%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 41215 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 41156
Query 60124 TATACTACCGAGGATTGAATATA 60146
||||||| |||||||| |||||
Sbjct 41155 TATACTATCGAGGATT--ATATA 41135
Score = 95.1 bits (104), Expect = 1e-14
Identities = 77/91 (85%), Gaps = 3/91 (3%)
Strand=Plus/Minus
Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115
|||||| || ||| || | |||||| |||||| ||||||||||||||||||||| |||
Sbjct 40678 AAAAATCATCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 40619
Query 60116 CTCACCACTATACTACCGAGGATTGAATATA 60146
|| |||||||||||| |||||||| |||||
Sbjct 40618 CTAACCACTATACTATCGAGGATT--ATATA 40590
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 41627 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 41568
Query 60126 TACTACCGAGGATT 60139
||||| ||||||||
Sbjct 41567 TACTATCGAGGATT 41554
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 40153 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 40094
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 40093 TACTATCGAGGAT 40081
>seq731
Length=200492
Score = 98.7 bits (108), Expect = 1e-15
Identities = 73/85 (86%), Gaps = 3/85 (4%)
Strand=Plus/Plus
Query 60057 AAAAATTT---TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113
|||||||| ||||| || | |||||| |||||| ||||||||||||||||||||| |
Sbjct 59789 AAAAATTTACATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 59848
Query 60114 TACTCACCACTATACTACCGAGGAT 60138
|||| |||||||||||| |||||||
Sbjct 59849 TACTGACCACTATACTATCGAGGAT 59873
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 60570 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 60629
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 60630 ATACTATCGAGGAT 60643
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 64633 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 64692
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 64693 ATACTATCGAGGAT 64706
>seq989
Length=166514
Score = 95.1 bits (104), Expect = 1e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 137383 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 137442
Query 60124 TATACTACCGAGGAT 60138
||||||| |||||||
Sbjct 137443 TATACTATCGAGGAT 137457
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 139058 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 139117
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 139118 ATACTATCGAGGA 139130
>seq257
Length=353820
Score = 93.3 bits (102), Expect = 5e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 60060 AATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCA 60119
||| | |||| || | |||||| |||||| ||||||||||||||||||||| ||||| |
Sbjct 97728 AATCTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGA 97787
Query 60120 CCACTATACTACCGAGGAT 60138
||||||||||| |||||||
Sbjct 97788 CCACTATACTATCGAGGAT 97806
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 110366 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 110307
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 110306 ATACTATCGAGGAT 110293
>seq182
Length=417349
Score = 93.3 bits (102), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 15256 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 15197
Query 60125 ATACTACCGAGGATTG 60140
|||||| |||||| ||
Sbjct 15196 ATACTATCGAGGACTG 15181
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 15556 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 15615
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 15616 ATACTATCGAGGA 15628
>seq13719
Length=15318
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/84 (85%), Gaps = 3/84 (4%)
Strand=Plus/Plus
Query 60057 AAAAATTTT---CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113
|||||||| |||| || | |||||| |||||| ||||||||||||||||||||| |
Sbjct 13001 AAAAATTTGAGACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 13060
Query 60114 TACTCACCACTATACTACCGAGGA 60137
|||| |||||||||||| ||||||
Sbjct 13061 TACTAACCACTATACTATCGAGGA 13084
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 158 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 217
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 218 TACTATCGAGGA 229
>seq10163
Length=21949
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 11161 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 11220
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 11221 ATACTATCGAGGA 11233
>seq5397
Length=42826
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 38023 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 38082
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 38083 TACTATCGAGGA 38094
>seq3099
Length=68951
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 58200 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 58141
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 58140 TACTATCGAGGA 58129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571198107107600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |