Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq322 86.0 9e-12 >seq322 Length=316913 Score = 86.0 bits (94), Expect = 9e-12 Identities = 93/121 (77%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 146068 TACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCAT 146126 ||| |||||||||||||||| |||| || ||||| ||||| | | |||| | ||| | Sbjct 56219 TACTAAATGTAAAGTAGATTCCTTTTGA-ATATTGTAATCGGCTAAGGTTCGCCCATCTT 56277 Query 146127 CTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTT 146186 ||||||| ||||| || ||||| | | || ||||| ||||| || ||||| || |||| Sbjct 56278 CTAATTGCTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGAGGGATCCCTTCCTTGTCTT 56337 Query 146187 G 146187 | Sbjct 56338 G 56338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742720882086400