Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq81517 190 2e-43 >seq81517 Length=1088 Score = 190 bits (210), Expect = 2e-43 Identities = 318/457 (70%), Gaps = 2/457 (0%) Strand=Plus/Minus Query 20196 TGGATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACA 20255 ||| ||| | || || |||| || |||||||| || |||||||||||||| ||| | || Sbjct 906 TGGTTTTCATAATCGCGAAGAAGGTGATTTGGGCCCCGTGTATGGATTTCAGTGGCGCCA 847 Query 20256 TTTTGGAGCTGAATATGTTGACATG-AACACAAATTATTTTGGACAAGGAGTAGATCAAT 20314 ||||||||| ||||| ||||| ||| ||||| | || |||| ||||||||| Sbjct 846 TTTTGGAGCCAAATATCGA-ACATGCAACGATAATTACTCGGGTGAAGGCGTAGATCAAC 788 Query 20315 TACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCG 20374 | |||||||| ||| || ||| || || || || || | | || || | | | Sbjct 787 TTCAAAATGTAATTGATACAATCCGAAACAAACCGAATGATCGTCGCATAATAATGTCTG 728 Query 20375 CCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAAT 20434 | ||||| | || | || |||||| | ||||| |||||| ||| |||| Sbjct 727 CGTGGAATCCCCTTGACATTCCGCAAATGGCACTACCTCCTTGTCATTGTCTAGCACAAT 668 Query 20435 TTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGAC 20494 ||| |||||| ||| ||| |||| ||||| |||||||||| |||||| |||||| Sbjct 667 TTTTCGTTGCAAATGGTGAGCTGTCTTGTCAGTTGTATCAACGTAGCGCTGACATGGGAT 608 Query 20495 TGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTA 20554 |||| || || |||||||| || |||||| || | || |||||||||||||| || | Sbjct 607 TGGGCGTGCCATTCAATATCGCCTCTTATGCTTTGTTAACATATATGATTGCACACGTGA 548 Query 20555 CAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATC 20614 | | | | || || || || ||||| | || || || ||| | || |||| Sbjct 547 CCGGACTTCGTCCCGGAGAATTCGTGCACACTCTTGGTGATGCCCATGTCTATAACAATC 488 Query 20615 ATATAGAACCTTTAAAATTACAGTTAACACGACAACC 20651 |||| ||||| |||||| |||| || |||| |||| Sbjct 487 ATATTGAACCCTTAAAAGAACAGATAGCACGTAAACC 451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398762345683150