Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_003313.1 Length=33106 Score E Sequences producing significant alignments: (Bits) Value seq52999 84.2 5e-12 >seq52999 Length=1923 Score = 84.2 bits (92), Expect = 5e-12 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 14523 GAAGGGGTAGAAAAGTAAGTCTTACGCCACTTTTTATGCGTAGCCATCGCCGAGGCGACT 14582 || ||||| |||||||| || | |||||||| || ||| ||||| | || || ||| Sbjct 760 GACGGGGTGGAAAAGTAGGTTTCGCGCCACTTCTTGTGCAGCGCCATGCCGGACGCCACT 701 Query 14583 TTGTTCAGCTCGTCAAACTTGCCGATCCAGAAATACTCATCAATATAAACGTGGCCGTGG 14642 || | ||| || | |||||| |||||||||||| ||||| | || | | |||||| Sbjct 700 TTCTGCAGTTCCTGAAACTTCGGGATCCAGAAATATTCATCCAGGTACAGATTGCCGTGA 641 Query 14643 TAACTCTGTGCCGTTTTGCCGTTGGT 14668 || ||||| || || | ||||||| Sbjct 640 TAGCTCTGCGCGGTGCGGGCGTTGGT 615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105708691864720