Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_004928.1
Length=167560
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 194 2e-44
seq85787 114 1e-20
>seq81708
Length=1085
Score = 194 bits (214), Expect = 2e-44
Identities = 157/190 (83%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 62059 GCCATTATAGACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCA 62118
|| |||| || || || ||||| ||||||| ||||| || |||||||| || || ||||
Sbjct 234 GCAATTACAGGCTTTCGGTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCA 293
Query 62119 GAGAGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCG 62178
| | ||||||||| || ||||| ||||| || || ||||||| ||| |||||||||||||
Sbjct 294 GCGCGTTAAAGCGCACGGCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCG 353
Query 62179 GATGCTTAACTGCATCTTCCAGAGTTTCGCGACGCAGAATGTTAACGTTCAGGTGTTGAC 62238
|||| || || |||||||||| ||||| |||||||| | ||| ||||||||||| ||||
Sbjct 354 GATGGTTCACGGCATCTTCCAACGTTTCACGACGCAGTACGTTTACGTTCAGGTGCTGAC 413
Query 62239 CACCTTCAAT 62248
||||||||||
Sbjct 414 CACCTTCAAT 423
>seq85787
Length=1013
Score = 114 bits (126), Expect = 1e-20
Identities = 129/173 (75%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 62076 GTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 62135
|| || ||||| | || || || |||||| || ||| || ||||| ||||| ||
Sbjct 602 GTGAAAGTACGTGTAATTACATCTTTCTGCTGCTCTTTAGTGAGCGAGTTGAAGCGTACA 661
Query 62136 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 62195
||||| || || || ||||||||||||||||||||||| |||||||| | | |||||
Sbjct 662 GCATAGCCAGAAACGCGGATGGTCAGCTGCGGATATTTCTCCGGATGTTCCATGGCATCC 721
Query 62196 TCCAGAGTTTCGCGACGCAGAATGTTAACGTTCAGGTGTTGACCACCTTCAAT 62248
||| | || ||| || | ||| |||||||| |||||||||||||| ||
Sbjct 722 AACAGCATCTCACGATTCATTACGTTGACGTTCAGATGTTGACCACCTTCGAT 774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 535483241664000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |