Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq322 167 5e-36 seq280 156 1e-32 seq4530 149 1e-30 seq22 147 5e-30 seq21746 134 3e-26 seq180 100 7e-16 seq59797 89.7 1e-12 >seq322 Length=316913 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || || || |||| |||||||| |||||| |||||||| || |||||||| || || | | Sbjct 56202 CCTCCCCTGAGCCGAAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAATCGGCT 56261 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | |||| || ||||||| ||| ||||| || |||||||| | ||||||||| ||||| Sbjct 56262 AAGGTTCGCCCATCTTCTAATTGCTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGAGGG 56321 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| || || ||||| || || || |||| || | ||||| ||| || ||| Sbjct 56322 ATCCCTTCCTTGTCTTGAATTTTCGCCTTAACATGCTCAATTGTATCCGAAGGCTCAACC 56381 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||||||||| || || || || || || || || ||||| Sbjct 56382 TCAAGAGTAATAGTCTTGCCCGTTAGGGTCTTAACGAAAATTTGCAT 56428 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || || || |||| |||||||| |||||| |||||||| || |||||||| || | | | Sbjct 38759 CCTCCCCTGAGCCGAAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAACCGGCT 38700 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | |||| || ||||| ||||||||| || |||||||| | ||||||||| || || Sbjct 38699 AAGGTTCGCCCATCTTCCTATTGTTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGGGGG 38640 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||| | || || ||||| ||||| || |||| || | ||||| ||| || ||| Sbjct 38639 ATCCCTCCCTTGTCTTGAATTTTTGCCTTCACATGCTCAATTGTATCCGAAGGCTCAACC 38580 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||||||||| | || || || || || || || ||||| Sbjct 38579 TCAAGAGTAATAGTCTTGCGCGTTAGGGTCTTAACGAAAATTTGCAT 38533 >seq280 Length=341618 Score = 156 bits (172), Expect = 1e-32 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 |||| ||| ||||||||||| ||||||||||| |||||||| | || | || || || Sbjct 106271 ACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGACAATGTGCGTCCATCCTCC 106330 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | || || ||||| ||||||| | |||||||| || || |||||||| ||||||||| Sbjct 106331 AACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCCTGA 106390 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 || || ||||| ||||| || | ||||||| ||| || ||||| | || || || ||| Sbjct 106391 ATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTA 106450 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | ||||| || || |||||||| Sbjct 106451 CCCGTCAAAGTTTTGACGAAAATCTGCAT 106479 Score = 156 bits (172), Expect = 1e-32 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 |||| ||| ||||||||||| ||||||||||| |||||||| | || | || || || Sbjct 114517 ACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGACAATGTGCGTCCATCCTCC 114576 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | || || ||||| ||||||| | |||||||| || || |||||||| ||||||||| Sbjct 114577 AACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCCTGA 114636 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 || || ||||| ||||| || | ||||||| ||| || ||||| | || || || ||| Sbjct 114637 ATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTA 114696 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | ||||| || || |||||||| Sbjct 114697 CCCGTCAAAGTTTTGACGAAAATCTGCAT 114725 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | || ||||| ||||||||||| ||||| || | ||| | ||||| Sbjct 104671 AAGCACCAAATGGAGAGTCGATTCCTTCTGAATATTGTAGTCGGACAAAGTACGGCCGTC 104730 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| | ||||| || |||||||| | | ||||||||| ||||| || ||||| ||||| Sbjct 104731 TTCCAACTGTTTACCGGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCCTTATC 104790 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| || || ||||| |||||||| | ||| || || || ||||| | || || || Sbjct 104791 CTGGATTTTGGCTTTAACATTTTCGATGGTGTCTGACGGCTCAACCTCCAAGGTGATGGT 104850 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || ||||| || || || |||||||| Sbjct 104851 TTTACCGGTCAGTGTCTTCACGAAGATCTGCAT 104883 Score = 136 bits (150), Expect = 9e-27 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | ||| || ||||| | |||||| || || || || || || || Sbjct 106478 ATGCCACCACGTAGACGAAGAACCAGATGAAGTGTAGACTCCTTTTGGATGTTGTAATCG 106537 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | |||||||| | |||||| || ||||| |||| | || ||||| || Sbjct 106538 GACAAGGTGCGTCCGTCTTCCAATTGTTTGCCGGCAAAGATTAAACGTTGCTGATCTGGT 106597 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || ||||| || |||||||| ||||||||||| || | |||||| ||||| Sbjct 106598 GGAATACCCTCTTTGTCTTGAATCTTGGCTTTTACATTCTCAATAGTATCGGATGGTTCA 106657 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||| || || || ||||| ||||| | || || || || || |||||||| Sbjct 106658 ACCTCCAGAGTGATGGTCTTGCCAGTCAAAGTCTTCACGAAGATTTGCATTTT 106710 Score = 136 bits (150), Expect = 9e-27 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | ||| || ||||| | |||||| || || || || || || || Sbjct 114724 ATGCCACCACGTAGACGAAGAACCAGATGAAGTGTAGACTCCTTTTGGATGTTGTAATCG 114783 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | |||||||| | |||||| || ||||| |||| | || ||||| || Sbjct 114784 GACAAGGTGCGTCCGTCTTCCAATTGTTTGCCGGCAAAGATTAAACGTTGCTGATCTGGT 114843 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || ||||| || |||||||| ||||||||||| || | |||||| ||||| Sbjct 114844 GGAATACCCTCTTTGTCTTGAATCTTGGCTTTTACATTCTCAATAGTATCGGATGGTTCA 114903 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||| || || || ||||| ||||| | || || || || || |||||||| Sbjct 114904 ACCTCCAGAGTGATGGTCTTGCCAGTCAAAGTCTTCACGAAGATTTGCATTTT 114956 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || || || || || ||||| || | || | |||||||| | |||||| || Sbjct 105143 GTAGACTCCTTTTGGATGTTGTAGTCCGACAAGGTGCGGCCGTCTTCCAATTGTTTACCG 105202 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| | | |||||||| ||||| || ||||||||||| |||||||| || || Sbjct 105203 GCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGAATCTTGGCCTTG 105262 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || ||||| | ||| || || || ||||| | || || || |||||||| || || Sbjct 105263 ACGTTTTCGATGGTGTCTGACGGCTCAACCTCCAAGGTGATGGTTTTACCAGTTAGGGTC 105322 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 105323 TTCACGAAGATTTGCAT 105339 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || || || || || ||||| || | || | || ||||| ||||| || || Sbjct 105599 GTAGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTCGAGTTGCTTGCCG 105658 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || |||| | ||| ||||| ||||| || || || || ||||| ||||| ||||| Sbjct 105659 GCGAAGATTAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGGATCTTAGCTTTG 105718 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| || || ||||| | || || || |||||||| || || Sbjct 105719 ACGTTCTCAATGGTGTCGGATGGCTCAACCTCCAACGTGATGGTTTTACCAGTTAGGGTC 105778 Query 104543 TTTACAAATATCTGCAT 104559 || |||||||||||||| Sbjct 105779 TTCACAAATATCTGCAT 105795 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || || || || || ||||| || | || | || ||||| ||||| || || Sbjct 113845 GTAGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTCGAGTTGCTTGCCG 113904 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || |||| | ||| ||||| ||||| || || || || ||||| ||||| ||||| Sbjct 113905 GCGAAGATTAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGGATCTTAGCTTTG 113964 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| || || ||||| | || || || |||||||| || || Sbjct 113965 ACGTTCTCAATGGTGTCGGATGGCTCAACCTCCAACGTGATGGTTTTACCAGTTAGGGTC 114024 Query 104543 TTTACAAATATCTGCAT 104559 || |||||||||||||| Sbjct 114025 TTCACAAATATCTGCAT 114041 Score = 109 bits (120), Expect = 1e-18 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || || || || || ||||| || | || | |||||||| || || || ||| Sbjct 105371 GTAGACTCCTTTTGGATGTTGTAGTCCGACAAGGTGCGCCCGTCTTCGAGCTGCTTACCA 105430 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | | || || || ||||| || ||||| || || |||||||| || || Sbjct 105431 GCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGCCTTG 105490 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || ||||| | ||| ||| || || ||||| | || ||||| || ||||| || || Sbjct 105491 ACGTTTTCAATGGTGTCGGATGGCTCAACCTCCAAGGTTATAGTTTTGCCAGTCAGGGTC 105550 Query 104543 TTTACAAATATCTGCATT 104560 || || || || |||||| Sbjct 105551 TTCACGAAGATTTGCATT 105568 Score = 98.7 bits (108), Expect = 2e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| || || || ||||||||||| | | || || || ||||| || ||||| Sbjct 113656 CCGTCTTCGAGCTGCTTACCAGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCC 113715 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || || |||||||| || || || ||||| | ||| ||| || || ||||| | || Sbjct 113716 TTGTCTTGAATCTTGGCCTTGACGTTTTCAATGGTGTCGGATGGCTCAACCTCCAAGGTT 113775 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| || ||||| || || || || || || |||||| Sbjct 113776 ATAGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCATT 113814 >seq4530 Length=49833 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || || || |||| |||||||| |||||| |||||||| || |||||||| || | | | Sbjct 18533 CCTCCCCTGAGCCGAAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAACCGGCT 18474 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | |||| || ||||| ||||||||| || |||||||| | ||||||||| || || Sbjct 18473 AAGGTTCGCCCATCTTCCTATTGTTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGGGGG 18414 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||| | || || ||||| ||||| || |||| || | ||||| ||| || ||| Sbjct 18413 ATCCCTCCCTTGTCTTGAATTTTTGCCTTCACATGCTCAATTGTATCCGAAGGCTCAACC 18354 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||||||||| | || || || || || || || ||||| Sbjct 18353 TCAAGAGTAATAGTCTTGCGCGTTAGGGTCTTAACGAAAATTTGCAT 18307 >seq22 Length=933496 Score = 147 bits (162), Expect = 5e-30 Identities = 289/415 (70%), Gaps = 13/415 (3%) Strand=Plus/Plus Query 268877 GATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAA 268936 |||||||| || || ||||| |||| || ||| | ||||| || || || | || Sbjct 329224 GATGGTATTGTGAATGAAAACTTAGTTGAACGCTTCAGCCAAGAAGTTCAAATCACAGAG 329283 Query 268937 GCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGT 268996 || | || || || ||||| || || || || || ||| | ||||| || |||||||| Sbjct 329284 GCGCGTTGCTTCTATGGATTTCAAATCGCCATGGAGAATGTGCATTCTGAAATGTACAGC 329343 Query 268997 CTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTC--TTCTA 269054 ||||||| ||||| ||||| | ||| ||| | |||| | ||| | ||| | ||| Sbjct 329344 ATATTAATTGATACATATATTAAGGATGGCAA-GCAAAGGGATTACT-TGTTCAATGCTA 329401 Query 269055 T-GAGAACTATGGACTG-TGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATA--AAC 269110 | |||| | ||| ||| ||| | || |||| ||||| ||| ||||| | | Sbjct 329402 TTGAGA-CGATGC-CTGCTGTTAAGCGCAAGGCTGATTGGGCACTGGCGTGGATTTCATC 329459 Query 269111 GATAGCGCGC--CTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCT 269168 || | || | ||| || ||| | || | || |||||||| || ||||| || |||| Sbjct 329460 GAAATCGGCCAACTTT-GGCGAACGTATAATAGCATTTGCCGCGGTTGAAGGCATTTTCT 329518 Query 269169 TTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAA 269228 || || |||||| | ||||||||| |||||||| | ||||| ||||| || || | Sbjct 329519 TTAGTGGCAGTTTTGCTTCAATCTTTTGGCTGAAGAAACGGGGCCTAATGCCTGGTTTGA 329578 Query 269229 CTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTG 269283 | |||||||| || | || ||||||||||| ||||| ||||| || ||||| Sbjct 329579 CATTCTCTAATGAGCTAATTTCAAGGGACGAAGGATTACATTGCGATTTTGCTTG 329633 >seq21746 Length=7614 Score = 134 bits (148), Expect = 3e-26 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || ||||| || | ||| | ||| ||||| | ||| || || Sbjct 2392 GTTGACTCCTTTTGAATGTTGTAGTCGGACAAAGTACGACCATCTTCCAATTGCTTGCCG 2333 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| | | |||||||| || ||||| ||||||||||| || || || || || Sbjct 2332 GCGAAAATCAAACGTTGTTGATCTGGTGGTATACCTTCTTTATCTTGGATTTTAGCCTTG 2273 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | || || ||| || ||||| | || || ||||| || ||||||||| Sbjct 2272 ACATTTTCGATAGTGTCAGAAGGCTCGACCTCCAAAGTGATGGTCTTGCCCGTAAGTGTT 2213 Query 104543 TTTACAAATATCTGCATTTTGT 104564 || || || ||||||||||||| Sbjct 2212 TTGACGAAAATCTGCATTTTGT 2191 >seq180 Length=417715 Score = 100 bits (110), Expect = 7e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 238564 TCGAGAGAGCCGAAACTCACGATCCCCTATGGAATTCCGCCCAGATACAAATGGTAAGAC 238623 ||||| ||| | || |||||| || |||||| | || ||| | ||| ||| || Sbjct 110275 TCGAGCAGGCCCACACACACGATGATCTTTGGAATGCGGCACAGGTTCAATTGGCAAATG 110334 Query 238624 TAGGCAAAATGCATAGTTTCTTACGAATGTATTGGGCTAAAAAGATACTTGAATGGACTA 238683 ||||||||||||| |||| |||| ||||| ||||| |||||||||||||||||| | Sbjct 110335 AAGGCAAAATGCATGGTTTTCTACGCATGTACTGGGCAAAAAAGATACTTGAATGGGCCG 110394 Query 238684 GATCTCCAAAGGAAGCTCTTAGATATAG-TATTTATCTGAACGATAAATACGAACTCGAC 238742 | || | |||| |||||| || | ||| || |||| || |||||| | || Sbjct 110395 CTACGCCGGAACAAGC-CTTAGAAATTGCTATCTACTTGAATGACAAATACAGTTTAGAT 110453 Query 238743 GGTACGGATCCTAACGGATACGTAGGT 238769 || |||||| ||||| || |||||| Sbjct 110454 GGACGGGATCCAAACGGCTATGTAGGT 110480 >seq59797 Length=1646 Score = 89.7 bits (98), Expect = 1e-12 Identities = 122/170 (72%), Gaps = 3/170 (2%) Strand=Plus/Plus Query 269081 aaaTCTGAATGGGCTCTGAAATGGATAAA---CGATAGCGCGCCTTACGGAGAAAGGTTA 269137 ||| |||| ||||| | || ||||| || ||| | || | | || || || || Sbjct 1465 AAAGCTGACTGGGCAGTTAAGTGGATCAATGACGAGAAAGCATCATTTGGTGAGAGACTA 1524 Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 || || ||||| || ||||||||||| ||||| || || || ||||| | || || ||| Sbjct 1525 GTAGCATTTGCTGCCGTAGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATTTTCTGG 1584 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGAT 269247 | ||||| ||||| | ||||| || || || |||||||| ||||| || Sbjct 1585 CTCAAGAAGAGAGGTTTGATGCCTGGTTTGACATTCTCTAATGAATTAAT 1634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150119818852360