Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_005859.1
Length=121750
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 122 7e-23
seq85787 113 4e-20
>seq81708
Length=1085
Score = 122 bits (134), Expect = 7e-23
Identities = 133/175 (76%), Gaps = 4/175 (2%)
Strand=Plus/Plus
Query 27669 GTAAATGTACGACTAATAACGTCGTTCTGCTGTTCACGCGTCAGTGCGTTAAAACGCACA 27728
|||||||||||| ||||||| || |||||| || ||||||| |||||||| |||||
Sbjct 251 GTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCAGCGCGTTAAAGCGCACG 310
Query 27729 GCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGATGTTTCTGTGCATC- 27787
|| || || ||||| || || || || || || |||||||| ||||| ||| |||||
Sbjct 311 GCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCGGATGGTTCACGGCATCT 370
Query 27788 -CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGTTGACCACCTTCAAT 27841
| || | | ||||||| | || || || || ||||| ||||||||||||||
Sbjct 371 TCCAACGTT--TCACGACGCAGTACGTTTACGTTCAGGTGCTGACCACCTTCAAT 423
>seq85787
Length=1013
Score = 113 bits (124), Expect = 4e-20
Identities = 137/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 27655 ATTACATCGCCTGAGTAAATGTACGACTAATAACGTCGTTCTGCTGTTCACGCGTCAGTG 27714
|||||| || ||| || || ||||| |||| || || |||||||| || || || |
Sbjct 588 ATTACAACGACTGGGTGAAAGTACGTGTAATTACATCTTTCTGCTGCTCTTTAGTGAGCG 647
Query 27715 CGTTAAAACGCACAGCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGAT 27774
||| || || ||||| || || ||||| ||||| || | || || ||||| || ||||
Sbjct 648 AGTTGAAGCGTACAGCATAGCCAGAAACGCGGATGGTCAGCTGCGGATATTTCTCCGGAT 707
Query 27775 GTTTCTGTGCATCCAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGTTGACCAC 27834
||| | |||||||| ||| |||||| | | || ||||| || || ||||||||||
Sbjct 708 GTTCCATGGCATCCAACAGCATCTCACGATTCATTACGTTGACGTTCAGATGTTGACCAC 767
Query 27835 CTTCAAT 27841
|||| ||
Sbjct 768 CTTCGAT 774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 389063800997570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |