Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq21746 91.5 1e-13
seq322 84.2 2e-11
>seq21746
Length=7614
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| ||||| |||||||| || ||||| || ||||| || | || ||| |
Sbjct 2193 AAAATGCAGATTTTCGTCAAAACACTTACGGGCAAGACCATCACTTTGGAGGTCGAGCCT 2252
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|||||| | | | | || || ||||| ||||||||||| | || |||
Sbjct 2253 TCTGACACTATCGAAAATGTCAAGGCTAAAATCCAAGATAAAGAAGGTATACCACCAGAT 2312
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
|| ||| | | |||| || ||||| ||||| ||||||| || || |||| ||
Sbjct 2313 CAACAACGTTTGATTTTCGCCGGCAAGCAATTGGAAGATGGTCGTACTTTGTCCGACTAC 2372
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||||||||| ||||| || | || |||||||| | |||| || ||
Sbjct 2373 AACATTCAAAAGGAGTCAACCCTCCACTTGGTGTTGCGTCTGCGTGGTGG 2422
>seq322
Length=316913
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||| || || || || ||||| || || ||||| | || ||| |
Sbjct 56428 ATGCAAATTTTCGTTAAGACCCTAACGGGCAAGACTATTACTCTTGAGGTTGAGCCTTCG 56369
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|| || ||| || || || |||||| || || ||||| |||| |||||
Sbjct 56368 GATACAATTGAGCATGTTAAGGCGAAAATTCAAGACAAGGAAGGGATCCCTCCAGATCAA 56309
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| | || |||| || || || ||||||||||||| |||| | |||||||| ||
Sbjct 56308 CAGCGCCTAATTTTCGCAGGAAAGCAATTAGAAGATGGGCGAACCTTAGCCGATTACAAT 56249
Query 115466 ATTCAAAAAGAGTCTACTATACAT 115489
|||||||| || |||||| |||||
Sbjct 56248 ATTCAAAAGGAATCTACTTTACAT 56225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424894713120400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |