Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq13731 223 3e-53
seq280 168 6e-37
seq76387 131 1e-25
seq322 129 5e-25
seq21746 120 3e-22
seq4530 116 3e-21
seq28390 109 5e-19
seq32170 98.7 8e-16
>seq13731
Length=15303
Score = 223 bits (246), Expect = 3e-53
Identities = 963/1498 (64%), Gaps = 36/1498 (2%)
Strand=Plus/Plus
Query 128771 TTTGCGACT--TGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATA 128828
||||||||| ||||||| ||||||| ||||| | || || || ||||| || || ||
Sbjct 550 TTTGCGACTCTTGTCCACAGTAAATTGTATAGCATTTGCAGCAGGTTTGGTACGTAAGTA 609
Query 128829 GTACATGCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGC 128888
|||||| |||||||| | ||| |||||| | | || || | || | |
Sbjct 610 GTACATTCCTGTTTTTAGACCCGCTTTCCAGCCATAGAAATGTATAGAAGTTAGTTTGCC 669
Query 128889 GTAGGTGGGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCG 128948
||| | || | | | || ||||| ||||| ||||| || || || | || ||
Sbjct 670 ATAGTTTGGCTCTGCGACATGTATGTTAAACGATTGGCTTTGGTCGATGAATGCTCCCCG 729
Query 128949 ATCGGCAGCCATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTC 129008
||| || ||||| ||| || |||| || |||||||| || |||||||| || ||
Sbjct 730 ATCTGCTGCCATTTTAATTGAAGTTTTAACCGAGATTTCCCATACAGTTTTGTACAGATC 789
Query 129009 TCTCACGTGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTT 129068
| | ||| | ||||| ||| ||| || | | ||| | | | |||||||||
Sbjct 790 GCGAATGTGCTGCGGTATGGATTCTATGCCTTGTATGGAGCCACGGCTAGTAATAATTTT 849
Query 129069 GTTTCGCATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTT 129128
||| ||| | || | ||||| || | | | |||| ||| | | ||
Sbjct 850 ATTTTTCATGTCATCATCCCACAAACCCAACTCAGTGAGATCGCGCAGCAAATGATGATT 909
Query 129129 TATTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTC 129188
|| |||||||| || || | | ||||| || ||| ||||| ||| | || ||
Sbjct 910 TACAACTTGAAATTCGCCAGAGAGTACGCGACGTGTGTAGATGTTAGAAGTGTAGGGTTC 969
Query 129189 AAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCA 129248
|| || ||||| ||||| | ||||| || |||| ||||||||||| | || |||
Sbjct 970 GAATGACTCATTATTGCCCATGATTTGCGCAGTTGAAGCGGTGGGCATAGGTG-CAAGCA 1028
Query 129249 -AAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACA 129307
|| || || | | ||| ||||||||||| | | || |||| |||||||| ||| |
Sbjct 1029 GGAGGGAATTCCTAACACCATGCTGTTTAATTTTCTCCTTCAATTCTGTCCAGTTCCAGA 1088
Query 129308 TCGATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACC----CAAACTGGCGGGA 129363
| ||||| | | || ||||| ||| ||||| | || || | |||||| |
Sbjct 1089 GCTCAGTGGGCTTCTTATCCCACATGTCATATTGTAGAATTCCCTTGCTAACTGGACAGC 1148
Query 129364 CTGGAAAAGTAGGAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAAT 129423
|| | |||| || | ||||| | |||||||| ||||| ||||| |||
Sbjct 1149 CTTCATAAGT----TTCATAGGTACCGTATTTCTCAGCCAATTCACAACTAGCTTCTAAT 1204
Query 129424 GCGCCAAAATAAATTGTTTCGGCAATTTTGGTG-TTCAACACTTTGGCCTGGTCGCTTTC 129482
|| ||| ||||||| ||||| | || || || || || | || || ||||||||
Sbjct 1205 GCACCATAATAAATGGTTTC-GAAAACCTGTTGATTTAAAAGGAATGCTTGTTCGCTTTC 1263
Query 129483 GTACGGCATA-CGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGG 129541
|||||| ||| |||| | || | ||| || |||||||| | || | ||||| |
Sbjct 1264 GTACGG-ATAGCGCATAAGTATAAGAGCGTCTGCAAAACCTTGTACGCCGATCCCGATTG 1322
Query 129542 GTCGATGTTTTCTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAA 129601
| || ||| | || ||||||| |||| ||| || |||| || || || || |
Sbjct 1323 GACGGTGTCTAAAGTTTGATTTTTTTGCCTCGGGCAATGGGTAGTGATTTATTTCAATGA 1382
Query 129602 TTTTGTTTAAA-TTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTAC 129660
|||| || ||| ||| || |||| |||| || || | || | | || |||| |||
Sbjct 1383 TTTTATTCAAATTTCGTG-TCACAGTTTTGGTGACTTCCTTGAGCCGTTGGAAATCGTAA 1441
Query 129661 TCGCCTACATCGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCA 129720
| || | ||| |||||| || | | || || || || ||||| || ||
Sbjct 1442 GTTTTTTCA--GGTGT-GACAAACATGTTCAAAGCGATTGATGCTAAGTTGCATACAGCC 1498
Query 129721 CTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTG 129780
|| | || || ||||||||||| | ||| | ||| || ||||||||||
Sbjct 1499 ACCTCATCAGGTGCAGAATATTCGACAATTTCAGTGCATAGATTGCTGCATTTAATGGTG 1558
Query 129781 CCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTG 129840
|| | || | ||||||||||| | || || ||||| ||||||| ||| || || ||
Sbjct 1559 CCAATATTTTGCTGATTACTTTTTCTATTACAGGCATCCTTGTACAACATATAAGGTGTA 1618
Query 129841 CCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAAC--AAGTC-TCGAGCCTTGATCTGT 129897
|| || || || || | || ||||| | |||| ||| | | |||| || | | ||
Sbjct 1619 CCGGTCTCCACCTGGGATT---CAATGATGGCGAACCAAAGACTTTGAGCTTTCA-CCGT 1674
Query 129898 CTTACAAATTTG-CCACATTTCTCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTG 129956
|||| | | || || || || ||| | || ||| |||||| |||
Sbjct 1675 CTTATTAGCGCGTCCTTCCTTTTCATACTTTGTATATAATTTTTCGAATTCTTCGCCCCA 1734
Query 129957 TAC--GGTGTCGAGCAACGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCT 130014
|| ||| ||| | || ||| | | ||||||||||| |||| ||| | |||
Sbjct 1735 AACCTCATGT-AAGCCA-GGACATTTATGTGGACACATCAATGACCACTCTCCGTTAGCT 1792
Query 130015 TCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTT 130074
|| || |||| ||| || ||||| |||| ||||| || || || ||||||| |||
Sbjct 1793 TCCACACGTTCCATGAATAAATCTGGTATCCACAAAGCATAAAATAAATCTCTGGCTCGG 1852
Query 130075 CTATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCAC 130134
|| || || | || |||| || | || || |||| || || |||||
Sbjct 1853 TGCTCTTCTTTTCCAGTATTCTTCTTCAAATCCAAAAACTCAAAAATATCTGCATGCCAT 1912
Query 130135 GGTTCAACATAAATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAACGTGGCGC 130191
||||| | ||||| || | ||||| ||| ||| || || || || |||| ||
Sbjct 1913 GGTTCCAAGTAAATGGCAAAGGCGCCAGGCCGCTTGCCACCACCCTGATCTACGTAACGT 1972
Query 130192 ACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGC 130249
| | || ||| | || |||||||||| |||| || || | ||||| |||||||
Sbjct 1973 GCAACGTTATTGAATACCCGCAACATTGGTACCAAACCATTTGAAGTGCCATTTGTGC 2030
>seq280
Length=341618
Score = 168 bits (186), Expect = 6e-37
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||||||||| || || || ||||| ||||||| || || ||| | ||
Sbjct 106251 ATGCAAATATTTGTTAAAACATTGACTGGCAAAACCATCACTCTGGAGGTTGAACCTTCC 106192
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | ||| ||||| ||||| ||||| ||||| ||||| ||||||
Sbjct 106191 GATACTATCGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAA 106132
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||| ||| | || ||| ||||||| | |||||||| |||
Sbjct 106131 CAGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCTTGTCCGATTATAAC 106072
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| |||||||| || ||| | |||||||| |||| | || || |||
Sbjct 106071 ATACAAAAAGAGTCTACCCTGCATTTAGTCCTGCGTCTCCGTGGTGGT 106024
Score = 168 bits (186), Expect = 6e-37
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||||||||| || || || ||||| ||||||| || || ||| | ||
Sbjct 114497 ATGCAAATATTTGTTAAAACATTGACTGGCAAAACCATCACTCTGGAGGTTGAACCTTCC 114438
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | ||| ||||| ||||| ||||| ||||| ||||| ||||||
Sbjct 114437 GATACTATCGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAA 114378
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||| ||| | || ||| ||||||| | |||||||| |||
Sbjct 114377 CAGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCTTGTCCGATTATAAC 114318
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| |||||||| || ||| | |||||||| |||| | || || |||
Sbjct 114317 ATACAAAAAGAGTCTACCCTGCATTTAGTCCTGCGTCTCCGTGGTGGT 114270
Score = 163 bits (180), Expect = 2e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || |||||||| || |||||||| ||||| | || || || | ||
Sbjct 106479 ATGCAGATTTTCGTCAAAACTTTGACGGGTAAAACCATCACTTTGGAGGTTGAGCCTTCC 106420
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || || ||||| |||||||| || ||||| || || ||||| ||||||
Sbjct 106419 GATACCATTGAGAATGTCAAAGCTAAAATTCAGGATAAGGAAGGAATCCCACCAGATCAA 106360
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || || ||||| ||||| |||||| ||||| | || || |||||
Sbjct 106359 CAACGTTTAATTTTCGCTGGCAAGCAGTTGGAGGATGGACGCACATTGTCTGACTACAAT 106300
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || ||||| || | |||||||||||||| | || ||||||
Sbjct 106299 ATTCAGAAGGAATCTACATTGCATTTAGTTTTGCGCCTACGTGGAGGT 106252
Score = 163 bits (180), Expect = 2e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || |||||||| || |||||||| ||||| | || || || | ||
Sbjct 114725 ATGCAGATTTTCGTCAAAACTTTGACGGGTAAAACCATCACTTTGGAGGTTGAGCCTTCC 114666
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || || ||||| |||||||| || ||||| || || ||||| ||||||
Sbjct 114665 GATACCATTGAGAATGTCAAAGCTAAAATTCAGGATAAGGAAGGAATCCCACCAGATCAA 114606
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || || ||||| ||||| |||||| ||||| | || || |||||
Sbjct 114605 CAACGTTTAATTTTCGCTGGCAAGCAGTTGGAGGATGGACGCACATTGTCTGACTACAAT 114546
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || ||||| || | |||||||||||||| | || ||||||
Sbjct 114545 ATTCAGAAGGAATCTACATTGCATTTAGTTTTGCGCCTACGTGGAGGT 114498
Score = 152 bits (168), Expect = 4e-32
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| |||||||| || || || ||||| || || || || ||||||| || || ||| |
Sbjct 106711 AAAAATGCAAATCTTCGTGAAGACTTTGACTGGCAAGACCATCACTCTGGAGGTTGAACC 106652
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
||||||| | || || | ||| || ||||||||||| |||||||||||||| ||
Sbjct 106651 ATCCGATACTATTGAGAATGTAAAAGCCAAGATTCAAGACAAAGAGGGTATTCCACCAGA 106592
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||| |||||| | || |||||||||||||| || || || |||||| | ||||||||
Sbjct 106591 TCAGCAACGTTTAATCTTTGCCGGCAAACAATTGGAAGACGGACGCACCTTGTCCGATTA 106532
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTT 22428
|||||| ||||| || || || | ||| | |||
Sbjct 106531 CAACATCCAAAAGGAGTCTACACTTCATCTGGTT 106498
Score = 152 bits (168), Expect = 4e-32
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| |||||||| || || || ||||| || || || || ||||||| || || ||| |
Sbjct 114957 AAAAATGCAAATCTTCGTGAAGACTTTGACTGGCAAGACCATCACTCTGGAGGTTGAACC 114898
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
||||||| | || || | ||| || ||||||||||| |||||||||||||| ||
Sbjct 114897 ATCCGATACTATTGAGAATGTAAAAGCCAAGATTCAAGACAAAGAGGGTATTCCACCAGA 114838
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||| |||||| | || |||||||||||||| || || || |||||| | ||||||||
Sbjct 114837 TCAGCAACGTTTAATCTTTGCCGGCAAACAATTGGAAGACGGACGCACCTTGTCCGATTA 114778
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTT 22428
|||||| ||||| || || || | ||| | |||
Sbjct 114777 CAACATCCAAAAGGAGTCTACACTTCATCTGGTT 114744
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || |||| |||||||| |||| | || || || | ||
Sbjct 105795 ATGCAGATATTTGTGAAGACCCTAACTGGTAAAACCATCACGTTGGAGGTTGAGCCATCC 105736
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | ||||| || || || ||||||||||||||||| || |||||
Sbjct 105735 GACACCATTGAGAACGTCAAAGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAG 105676
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||| || | || ||| ||||||| | ||||| ||||||
Sbjct 105675 CAGCGTTTAATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACCTTGTCCGACTACAAC 105616
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| ||||| || || || | || || ||| |||| ||||||||||
Sbjct 105615 ATCCAAAAGGAGTCTACGCTCCACTTGGTTCTGCGTCTGCGCGGAGG 105569
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || |||| |||||||| |||| | || || || | ||
Sbjct 114041 ATGCAGATATTTGTGAAGACCCTAACTGGTAAAACCATCACGTTGGAGGTTGAGCCATCC 113982
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | ||||| || || || ||||||||||||||||| || |||||
Sbjct 113981 GACACCATTGAGAACGTCAAAGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAG 113922
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||| || | || ||| ||||||| | ||||| ||||||
Sbjct 113921 CAGCGTTTAATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACCTTGTCCGACTACAAC 113862
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| ||||| || || || | || || ||| |||| ||||||||||
Sbjct 113861 ATCCAAAAGGAGTCTACGCTCCACTTGGTTCTGCGTCTGCGCGGAGG 113815
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || |||| |||||||| |||| | || || || | |
Sbjct 105339 ATGCAAATCTTCGTGAAGACCCTAACTGGTAAAACCATCACCTTGGAGGTTGAGCCGTCA 105280
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | |||| || |||||||| || || || ||||| || ||||||
Sbjct 105279 GACACCATCGAAAACGTCAAGGCCAAGATTCAAGATAAAGAAGGCATTCCTCCAGATCAA 105220
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || ||||| ||||| || || || ||||||| | || || ||||||
Sbjct 105219 CAACGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGCCGCACCTTGTCGGACTACAAC 105160
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || || ||| | ||||| || |||| | ||||| |||
Sbjct 105159 ATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCGTCTTCGCGGTGGT 105112
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||||||||| |||| | || || || | |
Sbjct 104883 ATGCAGATCTTCGTGAAGACACTGACCGGTAAAACCATCACCTTGGAGGTTGAGCCGTCA 104824
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | ||| ||||| || || ||||| |||||||| || ||||||
Sbjct 104823 GACACCATCGAAAATGTTAAAGCCAAAATCCAGGATAAGGAAGGTATTCCTCCAGATCAA 104764
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || |||||||| |||||||| || || ||| || | ||||| |||||
Sbjct 104763 CAGCGTTTGATTTTTGCCGGTAAACAGTTGGAAGACGGCCGTACTTTGTCCGACTACAAT 104704
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||| || ||||| || | ||||| || | || | ||||||||
Sbjct 104703 ATTCAGAAGGAATCGACTCTCCATTTGGTGCTTCGTCTTCGCGGAGG 104657
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || |||| || ||||| |||| | || || || | |
Sbjct 106023 ATGCAAATCTTCGTGAAGACCCTAACTGGCAAAACTATCACCTTGGAGGTTGAGCCATCA 105964
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | ||| || || ||||| ||||| |||||||| || |||||
Sbjct 105963 GACACCATCGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAG 105904
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||||||| | || ||| ||||||| | || || ||||||
Sbjct 105903 CAGCGTTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACCTTGTCTGACTACAAC 105844
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || || || | ||||| || |||| | || || |||
Sbjct 105843 ATCCAAAAGGAGTCTACTCTGCATTTGGTCCTGCGTCTTCGTGGTGGT 105796
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || |||| || ||||| |||| | || || || | |
Sbjct 114269 ATGCAAATCTTCGTGAAGACCCTAACTGGCAAAACTATCACCTTGGAGGTTGAGCCATCA 114210
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | ||| || || ||||| ||||| |||||||| || |||||
Sbjct 114209 GACACCATCGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAG 114150
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||||||| | || ||| ||||||| | || || ||||||
Sbjct 114149 CAGCGTTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACCTTGTCTGACTACAAC 114090
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || || || | ||||| || |||| | || || |||
Sbjct 114089 ATCCAAAAGGAGTCTACTCTGCATTTGGTCCTGCGTCTTCGTGGTGGT 114042
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || ||| | || || ||||| |||| | || || || | |
Sbjct 105111 ATGCAAATTTTCGTCAAGACTCTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCGTCA 105052
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || || || ||||| || ||||| ||||| ||||||
Sbjct 105051 GACACCATCGAGAACGTTAAGGCCAAGATCCAGGACAAAGAAGGTATCCCACCAGATCAA 104992
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||| ||| | || ||| ||| || | |||||||| |||
Sbjct 104991 CAGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGTACTTTGTCCGATTATAAC 104932
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || || ||| | ||||| || |||| | ||||| |||
Sbjct 104931 ATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCGTCTTCGCGGTGGT 104884
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | || || ||||| | || | || || || | ||
Sbjct 105567 ATGCAAATCTTCGTGAAGACCCTGACTGGCAAAACTATAACCTTGGAGGTTGAGCCATCC 105508
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | |||| || |||||||||||||| |||||||| || || ||
Sbjct 105507 GACACCATTGAAAACGTCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 105448
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || ||||| || || ||| | || || |||||| | || || ||||||
Sbjct 105447 CAACGTTTGATTTTTGCTGGTAAGCAGCTCGAAGACGGGCGCACCTTGTCGGACTACAAC 105388
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || || ||| | ||||| || |||| | || || |||
Sbjct 105387 ATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCGTCTCCGTGGTGGT 105340
>seq76387
Length=1185
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || ||||| || | ||||| || ||| ||||||| || ||||| ||| |
Sbjct 415 ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTGGAGCCCAGC 356
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | || || || |||||||||||||| ||||| || || ||
Sbjct 355 GACACCATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAG 296
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || ||||| ||| | ||||| |||||| |||| || ||||||
Sbjct 295 CAGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGGCGCACCCTCTCGGACTACAAC 236
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| ||||| || |||||| | || | || | || ||||||| ||
Sbjct 235 ATCCAAAAGGAGTCCACCCTCCACCTGGTCCTTCGTCTGCGCGGCGG 189
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | ||||| || || |||| || || ||||| ||| |
Sbjct 988 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGCCCAGC 929
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || || | || || || || ||||||||||| || || || || ||
Sbjct 928 GATACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 869
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || || || ||| | ||||| |||||| |||| |||||||||
Sbjct 868 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGACGGTCGCACCCTCTCGGATTACAAC 809
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || |||||| | || | || | || ||||||| |||
Sbjct 808 ATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCCGTCTGCGCGGTGGT 761
Score = 109 bits (120), Expect = 5e-19
Identities = 137/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || ||||| || | ||||| || ||| ||||||| || ||||| ||| |
Sbjct 760 ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTGGAGCCCAGC 701
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | || || || |||||||||||||| ||||| || || ||
Sbjct 700 GACACCATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAG 641
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || ||||| || | ||||| |||||| || ||| ||||||
Sbjct 640 CAGCGTCTCATCTTCGCTGGCAAGCAACTCGAGGACGGTCGCACCCTCAGCGACTACAAC 581
Query 22399 ATTCAAAA 22406
|| |||||
Sbjct 580 ATCCAAAA 573
>seq322
Length=316913
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| ||||| || |||| || || || | |||||||| || || | |
Sbjct 56428 ATGCAAATTTTCGTTAAGACCCTAACGGGCAAGACTATTACTCTTGAGGTTGAGCCTTCG 56369
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || ||||||||||||||||| || || || || ||||||
Sbjct 56368 GATACAATTGAGCATGTTAAGGCGAAAATTCAAGACAAGGAAGGGATCCCTCCAGATCAA 56309
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || || || || || ||||| ||| || ||| | ||||||||||
Sbjct 56308 CAGCGCCTAATTTTCGCAGGAAAGCAATTAGAAGATGGGCGAACCTTAGCCGATTACAAT 56249
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|||||||| ||||| || ||||||||||
Sbjct 56248 ATTCAAAAGGAATCTACTTTACATTTAGT 56220
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| ||||| || |||| | || || | |||||||| || || | |
Sbjct 38533 ATGCAAATTTTCGTTAAGACCCTAACGCGCAAGACTATTACTCTTGAGGTTGAGCCTTCG 38592
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || ||||||||||||||||| || || || || ||||||
Sbjct 38593 GATACAATTGAGCATGTGAAGGCAAAAATTCAAGACAAGGGAGGGATCCCCCCAGATCAA 38652
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || || || ||||| | || ||| || ||| | ||| ||||||
Sbjct 38653 CAGCGCCTAATTTTCGCAGGAAAACAATAGGAAGATGGGCGAACCTTAGCCGGTTACAAT 38712
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|||||||| ||||| || ||||||||||
Sbjct 38713 ATTCAAAAGGAATCTACTTTACATTTAGT 38741
>seq21746
Length=7614
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| ||||| || ||||| | || || || || ||||| | || || || |
Sbjct 2193 AAAATGCAGATTTTCGTCAAAACACTTACGGGCAAGACCATCACTTTGGAGGTCGAGCCT 2252
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || || | || || |||| ||||| ||||| || || ||||| ||||| |||
Sbjct 2253 TCTGACACTATCGAAAATGTCAAGGCTAAAATCCAAGATAAAGAAGGTATACCACCAGAT 2312
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
||||||||| | || || |||||||| || || || ||| || || | ||||| |||
Sbjct 2313 CAACAACGTTTGATTTTCGCCGGCAAGCAATTGGAAGATGGTCGTACTTTGTCCGACTAC 2372
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||||| || || ||| | || || || ||||| |||| || |||
Sbjct 2373 AACATTCAAAAGGAGTCAACCCTCCACTTGGTGTTGCGTCTGCGTGGTGGT 2423
>seq4530
Length=49833
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| ||||| || |||| | || || | |||||||| || || | |
Sbjct 18307 ATGCAAATTTTCGTTAAGACCCTAACGCGCAAGACTATTACTCTTGAGGTTGAGCCTTCG 18366
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || ||||||||||||||||| || || || || ||||||
Sbjct 18367 GATACAATTGAGCATGTGAAGGCAAAAATTCAAGACAAGGGAGGGATCCCCCCAGATCAA 18426
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || || || ||||| | || ||| || ||| | ||| ||||||
Sbjct 18427 CAGCGCCTAATTTTCGCAGGAAAACAATAGGAAGATGGGCGAACCTTAGCCGGTTACAAT 18486
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|||||||| ||||| || ||||||||||
Sbjct 18487 ATTCAAAAGGAATCTACTTTACATTTAGT 18515
>seq28390
Length=4902
Score = 109 bits (120), Expect = 5e-19
Identities = 165/235 (70%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 22212 TGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271
|| ||| |||||||| ||||| || || | || || || || |||| || || || ||
Sbjct 301 TGCAAACATGCAAATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGA 360
Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331
|| | ||||| | || || | || ||| || || ||||||||||| || || ||
Sbjct 361 GCCCTCTGATACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATCCCTCC 420
Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391
||| || || ||||| || || ||||| |||||| | ||||| ||||||| | || ||
Sbjct 421 CGACCAGCAGCGTCTCATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACCCTTTCGGA 480
Query 22392 TTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || || || ||| | || || || | ||| | || || |||
Sbjct 481 CTACAATATCCAGAAGGAGTCGACCCTCCACTTGGTCCTCCGACTCCGTGGTGGT 535
>seq32170
Length=3971
Score = 98.7 bits (108), Expect = 8e-16
Identities = 184/270 (68%), Gaps = 3/270 (1%)
Strand=Plus/Minus
Query 129983 GCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTA 130042
|||| ||||||| ||| | || ||||| | ||| || |||||||| | || || |
Sbjct 3854 GCGGGCACATCAGCGACCAGACGCCGTCCGCCTGGACGCGCTTCATAAAGAGGTCCGGCA 3795
Query 130043 CCCACAGGGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCA 130102
|||||| |||||| || | || || || ||||| | || |||| ||
Sbjct 3794 CCCACATGGCGTAGAAGAGGTCGCGGGCACGGAGCTCCTCCGAGCCGGTGTTCTTGCGCA 3735
Query 130103 GTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCT 130162
| || || || ||| | |||||||||||||||||||| | || || || | || |||
Sbjct 3734 GGTCGAGAAACTCGAAGATGTCGGCGTGCCACGGTTCGAGGTAGATGGCAAACGCCCCCG 3675
Query 130163 TCCGTTTG---CCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTG 130219
|| ||| || || ||||| |||| ||| ||| ||||||||||| |||| ||| |
Sbjct 3674 GGCGCTTGTTCCCGCCCTGGTCCACGTAGCGGGCGGTGTTGTTGTAGACGCGCAGCATCG 3615
Query 130220 CCTCCAATCCGTTGGCCGTGCCGTTTGTGC 130249
| ||| || ||| |||||||||||
Sbjct 3614 GCACCAGCCCATTGCTGACGCCGTTTGTGC 3585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419284645248550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |