Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_009821.1
Length=164270
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 127 2e-24
seq85787 114 1e-20
>seq81708
Length=1085
Score = 127 bits (140), Expect = 2e-24
Identities = 139/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 53316 AATTAGAGAGATTCGGTAAAGGTACGCGCGATAACGTCACGCTGCTGGTCTGGAGTCAGA 53375
||||| || ||||||||| ||||| | ||||| ||||||||||| ||||| |||||
Sbjct 236 AATTACAGGCTTTCGGTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCAGC 295
Query 53376 CTATTGAAGCGCACCGCGTAACCAGAAACGCGAATTGTAAGCTGCGGGTACTTCTCAGGA 53435
|| |||||||| || || || ||||||||||| || | ||| || || || || |||
Sbjct 296 GCGTTAAAGCGCACGGCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCGGA 355
Query 53436 TGTTCAACAGCGTCCAGCAACATTTCTCGTAACAATACGTTAACATTCAAATGCTGACCA 53495
|| | || || || |||| |||| || || |||||| || |||| |||||||||
Sbjct 356 TGGTTCACGGCATCTTCCAACGTTTCACGACGCAGTACGTTTACGTTCAGGTGCTGACCA 415
Query 53496 CCTTC 53500
|||||
Sbjct 416 CCTTC 420
>seq85787
Length=1013
Score = 114 bits (126), Expect = 1e-20
Identities = 137/186 (74%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 53317 ATTAGAGAGATTCGGTAAAGGTACGCGCGATAACGTCACGCTGCTGGTCTGGAGTCAGAC 53376
|||| | || | ||| || ||||| | || || || |||||| ||| ||| ||
Sbjct 588 ATTACAACGACTGGGTGAAAGTACGTGTAATTACATCTTTCTGCTGCTCTTTAGTGAGCG 647
Query 53377 TATTGAAGCGCACCGCGTAACCAGAAACGCGAATTGTAAGCTGCGGGTACTTCTCAGGAT 53436
|||||||| || || || ||||||||||| || || |||||||| || ||||| ||||
Sbjct 648 AGTTGAAGCGTACAGCATAGCCAGAAACGCGGATGGTCAGCTGCGGATATTTCTCCGGAT 707
Query 53437 GTTCAACAGCGTCCAGCAACATTTCTCGTAACAATACGTTAACATTCAAATGCTGACCAC 53496
|||| | || |||| || ||| || || || |||||| || |||| ||| |||||||
Sbjct 708 GTTCCATGGCATCCAACAGCATCTCACGATTCATTACGTTGACGTTCAGATGTTGACCAC 767
Query 53497 CTTCGA 53502
||||||
Sbjct 768 CTTCGA 773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 524966647436000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |