Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq76387 141 2e-28
seq280 138 3e-27
seq21746 123 6e-23
seq4881 120 7e-22
seq2574 118 2e-21
seq322 118 2e-21
seq4530 100 7e-16
>seq76387
Length=1185
Score = 141 bits (156), Expect = 2e-28
Identities = 170/230 (74%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| ||||| || | ||| || || || | ||| || |||||||| || ||||| | |
Sbjct 189 CCGCCGCGCAGACGAAGGACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCCGAG 248
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || || ||||||||||||||||| || || |||
Sbjct 249 AGGGTGCGCCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTG---GTCCGGG 305
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || || ||||| ||||| ||||| || || || | ||||| | ||
Sbjct 306 GGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATGGTGTCGCTGGGCTCC 365
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct 366 ACCTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 415
Score = 134 bits (148), Expect = 3e-26
Identities = 158/211 (75%), Gaps = 7/211 (3%)
Strand=Plus/Plus
Query 288267 GAGATGAATCGTGCTTTCT-TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325
|||||| | | |||| | |||||||| || |||||| ||| ||||| ||||| || |
Sbjct 553 GAGATGTAAAGAGCTTACCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCCTCGA 612
Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCT 288382
||| || || |||||||| |||||||| || || ||| || || || || || |
Sbjct 613 GTTGCTTGCCAGCGAAGATGAGACGCTGCTGG---TCCGGGGGAATGCCCTCCTTGTCTT 669
Query 288383 GGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCT 288442
|||| ||||| ||||| || || || | ||||| | || || ||||| ||||||||||
Sbjct 670 GGATCTTCGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCGAGAGTGATCGTCT 729
Query 288443 TCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| ||||| || ||||| ||||| ||||||||
Sbjct 730 TGCCGGTGAGGGTCTTAACGAAGATCTGCAT 760
>seq280
Length=341618
Score = 138 bits (152), Expect = 3e-27
Identities = 171/233 (73%), Gaps = 1/233 (0%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| || || | ||| || ||||||| || || |||||||| || || |
Sbjct 106477 CATG-CCACCACGTAGACGAAGAACCAGATGAAGTGTAGACTCCTTTTGGATGTTGTAAT 106535
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| | |||||||||||||| |||||||| || || ||||| | ||| || |||
Sbjct 106536 CGGACAAGGTGCGTCCGTCTTCCAATTGTTTGCCGGCAAAGATTAAACGTTGCTGATCTG 106595
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||| || || ||||| || || || || ||||| || || || |||| |||| | ||
Sbjct 106596 GTGGAATACCCTCTTTGTCTTGAATCTTGGCTTTTACATTCTCAATAGTATCGGATGGTT 106655
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
| || || || ||||| ||||| || |||| |||||| ||||| || ||||||
Sbjct 106656 CAACCTCCAGAGTGATGGTCTTGCCAGTCAAAGTCTTCACGAAGATTTGCATT 106708
Score = 138 bits (152), Expect = 3e-27
Identities = 171/233 (73%), Gaps = 1/233 (0%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| || || | ||| || ||||||| || || |||||||| || || |
Sbjct 114723 CATG-CCACCACGTAGACGAAGAACCAGATGAAGTGTAGACTCCTTTTGGATGTTGTAAT 114781
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| | |||||||||||||| |||||||| || || ||||| | ||| || |||
Sbjct 114782 CGGACAAGGTGCGTCCGTCTTCCAATTGTTTGCCGGCAAAGATTAAACGTTGCTGATCTG 114841
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||| || || ||||| || || || || ||||| || || || |||| |||| | ||
Sbjct 114842 GTGGAATACCCTCTTTGTCTTGAATCTTGGCTTTTACATTCTCAATAGTATCGGATGGTT 114901
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
| || || || ||||| ||||| || |||| |||||| ||||| || ||||||
Sbjct 114902 CAACCTCCAGAGTGATGGTCTTGCCAGTCAAAGTCTTCACGAAGATTTGCATT 114954
Score = 132 bits (146), Expect = 1e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| ||||| || | ||| || | ||| | || ||| || || ||||| |||||||
Sbjct 104657 CCTCCGCGAAGACGAAGCACCAAATGGAGAGTCGATTCCTTCTGAATATTGTAGTCGGAC 104716
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || |||||||| || ||||| || || || |||| |||||||||| |||||
Sbjct 104717 AAAGTACGGCCGTCTTCCAACTGTTTACCGGCAAAAATCAAACGCTGTTGA---TCTGGA 104773
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| ||||| |||||||||||||| ||||| || ||||| || | || || ||
Sbjct 104774 GGAATACCTTCCTTATCCTGGATTTTGGCTTTAACATTTTCGATGGTGTCTGACGGCTCA 104833
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | ||||| || || |||||||| ||||| ||||| ||||||||
Sbjct 104834 ACCTCCAAGGTGATGGTTTTACCGGTCAGTGTCTTCACGAAGATCTGCAT 104883
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| || | || || | ||| | || || |||||||| ||||| ||||
Sbjct 104885 CCACCGCGAAGACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTATAATCGGAC 104944
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || || ||||| | || || || |||||||| | |||||||||| ||||
Sbjct 104945 AAAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGG 105004
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| |||||||| |||||||| || || || ||||| || || | || || || ||
Sbjct 105005 ATACCTTCTTTGTCCTGGATCTTGGCCTTAACGTTCTCGATGGTGTCTGACGGCTCAACC 105064
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | ||||| || || || ||||||||||||||||| || |||||
Sbjct 105065 TCCAAGGTGATGGTTTTGCCAGTCAGAGTCTTGACGAAAATTTGCAT 105111
Score = 116 bits (128), Expect = 9e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || || ||||| ||||| | | |||||||| || || || || || || |||||
Sbjct 106288 TTCCTTCTGAATATTGTAGTCAGACAATGTGCGTCCATCCTCCAACTGCTTGCCAGCGAA 106347
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|| | ||| |||||| |||||||||||| |||||||| ||||| ||||| || ||
Sbjct 106348 AATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCCTGAATTTTAGCTTTGACATT 106407
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | |||| | || || || | ||||| || || || |||| ||| |||||
Sbjct 106408 CTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTACCCGTCAAAGTTTTGAC 106467
Query 288462 GAATATCTGCAT 288473
||| ||||||||
Sbjct 106468 GAAAATCTGCAT 106479
Score = 116 bits (128), Expect = 9e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || || ||||| ||||| | | |||||||| || || || || || || |||||
Sbjct 114534 TTCCTTCTGAATATTGTAGTCAGACAATGTGCGTCCATCCTCCAACTGCTTGCCAGCGAA 114593
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|| | ||| |||||| |||||||||||| |||||||| ||||| ||||| || ||
Sbjct 114594 AATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCCTGAATTTTAGCTTTGACATT 114653
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | |||| | || || || | ||||| || || || |||| ||| |||||
Sbjct 114654 CTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTACCCGTCAAAGTTTTGAC 114713
Query 288462 GAATATCTGCAT 288473
||| ||||||||
Sbjct 114714 GAAAATCTGCAT 114725
Score = 114 bits (126), Expect = 3e-20
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| || | || || | ||| | || || |||||||| || ||||| |
Sbjct 105113 CCACCGCGAAGACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAC 105172
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| |||||||| |||||||| || ||||| |||| ||| |||||| |||||
Sbjct 105173 AAGGTGCGGCCGTCTTCCAATTGTTTACCGGCGAAAATCAAACGTTGTTGA---TCTGGA 105229
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| ||||||||||| || || || || || |||||||| || | || || ||
Sbjct 105230 GGAATGCCTTCTTTATCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCTGACGGCTCA 105289
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | ||||| || || || || || ||||| ||||| || |||||
Sbjct 105290 ACCTCCAAGGTGATGGTTTTACCAGTTAGGGTCTTCACGAAGATTTGCAT 105339
Score = 107 bits (118), Expect = 5e-18
Identities = 141/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || ||||||| | ||||| || ||||| | ||| || || ||||||
Sbjct 105605 TCCTTTTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAG 105664
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| | |||||| ||| ||||| || || || || |||||||| || ||||| |||
Sbjct 105665 ATTAAACGCTGCTGA---TCTGGAGGAATACCCTCCTTGTCCTGGATCTTAGCTTTGACG 105721
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || || || | |||||| || || || || || |||||
Sbjct 105722 TTCTCAATGGTGTCGGATGGCTCAACCTCCAACGTGATGGTTTTACCAGTTAGGGTCTTC 105781
Query 288460 ACGAATATCTGCAT 288473
|| |||||||||||
Sbjct 105782 ACAAATATCTGCAT 105795
Score = 107 bits (118), Expect = 5e-18
Identities = 141/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || ||||||| | ||||| || ||||| | ||| || || ||||||
Sbjct 113851 TCCTTTTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAG 113910
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| | |||||| ||| ||||| || || || || |||||||| || ||||| |||
Sbjct 113911 ATTAAACGCTGCTGA---TCTGGAGGAATACCCTCCTTGTCCTGGATCTTAGCTTTGACG 113967
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || || || | |||||| || || || || || |||||
Sbjct 113968 TTCTCAATGGTGTCGGATGGCTCAACCTCCAACGTGATGGTTTTACCAGTTAGGGTCTTC 114027
Query 288460 ACGAATATCTGCAT 288473
|| |||||||||||
Sbjct 114028 ACAAATATCTGCAT 114041
>seq21746
Length=7614
Score = 123 bits (136), Expect = 6e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||| || || ||||||| | || || || ||||| ||||| || || |||||
Sbjct 2386 TCCTTTTGAATGTTGTAGTCGGACAAAGTACGACCATCTTCCAATTGCTTGCCGGCGAAA 2327
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| ||| |||||| ||| || ||||||||||| |||||||| || || || |||
Sbjct 2326 ATCAAACGTTGTTGATCTGGTGGTATACCTTCTTTATCTTGGATTTTAGCCTTGACATTT 2267
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| |||| || | || || || | ||||| ||||| || || || || ||||||
Sbjct 2266 TCGATAGTGTCAGAAGGCTCGACCTCCAAAGTGATGGTCTTGCCCGTAAGTGTTTTGACG 2207
Query 288463 AATATCTGCATTATGTTATTCTA 288485
|| ||||||||| |||| ||||
Sbjct 2206 AAAATCTGCATTTTGTTCGTCTA 2184
>seq4881
Length=46776
Score = 120 bits (132), Expect = 7e-22
Identities = 359/546 (66%), Gaps = 6/546 (1%)
Strand=Plus/Minus
Query 325055 AACCCCTTGTACCACGGTTTCATTTCGACGAGGTCCTCTCCAGATATCAAACGCTTCACA 325114
|| |||||| |||| || ||||| | || ||||| || |||| ||| |
Sbjct 37446 AAGCCCTTGAACCAGGGCTTCATCACCTTGACCTCCTCGCCGCGCATCATCCGCCGAATG 37387
Query 325115 TTATCTACGATGTCTTTAGGGTTGTAACTGGGAATGTTCGTCGACCATCCGGTTCCGATA 325174
|| || || ||||| || ||||| ||||||| || || ||| ||||| || ||
Sbjct 37386 TTGTCGACAATGTCCCGTGGATTGTAGTTGGGAATCTTGGTGCTCCACCCGGTGCCAATG 37327
Query 325175 CCACTCGAT-CCATTCACCAGGATACTCGGAATAACAGGCACATAATACTCTGGTTCGAT 325233
|| |||| || || ||||| | | ||||| | |||||||| ||||| || || ||
Sbjct 37326 CC-CTCGGCGCCGTTGACCAGCACCATGGGAATGATGGGCACATAGTACTCGGGCTCAAT 37268
Query 325234 CTTATCGCCGTCGTCGTACATATATTTCAGAAGATTGTCGTCCGTATCGACGAAA-ACCT 325292
||| | ||| ||||||| || || || || || ||| | ||| ||| | ||
Sbjct 37267 CTTGAGGTTGTCATCGTACAGGTAGTTTAGCAGCGGCTCATCCAGCT-GACTAAACAGCT 37209
Query 325293 GTCGAGTCTGAGGGTTCAGTTTCatatatatatatCGTGCACTCGCGTGATCCTTACCAC 325352
|| | | || | || | || | || || || || || ||| ||||| || |
Sbjct 37208 TCCGGGCGAGCGGACTGAGCATGGTAAAGATGTAACGGGCGCTGGCGGCGTCCTTGCCGC 37149
Query 325353 CCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGA 325412
|||||| | | || |||||||| |||| || | ||| ||||| ||||| ||||
Sbjct 37148 CCTGCAGGCGGGTGCCAAACTGGCCAATGGGCATCAGCAGGTTAATGTTGTTGCTGCCGA 37089
Query 325413 CATAATCCTGTGCAAGGTTCACGATGGTCC-CTTGCAGAGATGCTTCGCCATGGTGATAG 325471
|| | ||||| || ||||| | ||||||| | || || || | ||||| ||||| |||
Sbjct 37088 CAAAGTCCTGCGCCAGGTTGATGATGGTCGACATG-AGCGAGACCTCGCCGTGGTGGTAG 37030
Query 325472 GCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTG 325531
||||| ||||| | || | ||| | ||| || ||||| || ||| | | |||
Sbjct 37029 GCGCTGTGCTCGCCCACCGAGCCGGCCAGCTGCGCCACCTTGACCTCGCGCTTGTCGTTG 36970
Query 325532 CGCTTGAAAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGAC 325591
|||||||| | | | | ||| || || || || |||| || || || | ||||
Sbjct 36969 CGCTTGAAGCAGGTAAAGAGCACCTTGCGCTGGCCCGGCTTGAGCCCGTCCACCAGCGAC 36910
Query 325592 GGAATG 325597
||||||
Sbjct 36909 GGAATG 36904
>seq2574
Length=80092
Score = 118 bits (130), Expect = 2e-21
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || |||||| ||||| || ||||| || | || || || |||||||||
Sbjct 58862 TTCTGGATGTTGTAGTCGCTCAGCGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 58921
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| ||||| || | ||||| || || || |||||||| || || ||||| || ||
Sbjct 58922 AGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCG 58981
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAT 288465
|| | ||||| | || || ||||| ||||| ||||| || || || ||||| |||||
Sbjct 58982 ATGGTGTCGCTGGGCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 59041
Query 288466 ATCTGCAT 288473
||||||||
Sbjct 59042 ATCTGCAT 59049
>seq322
Length=316913
Score = 118 bits (130), Expect = 2e-21
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || | ||| | |||||| | ||| | || ||| ||||| ||||| || |||||
Sbjct 56202 CCTCCCCTGAGCCGAAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAATCGGCT 56261
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363
| || || || ||||||||||| ||||||||||| || || |||||||| ||||
Sbjct 56262 AAGGTTCGCCCATCTTCTAATTGCTTTCCTGCGAAAATTAGGCGCTGTTG---ATCTGGA 56318
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| ||||| || || || |||||||| || || | || || | ||| | ||
Sbjct 56319 GGGATCCCTTCCTTGTCTTGAATTTTCGCCTTAACATGCTCAATTGTATCCGAAGGCTCA 56378
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || ||||| || || || ||||| ||||| || |||||
Sbjct 56379 ACCTCAAGAGTAATAGTCTTGCCCGTTAGGGTCTTAACGAAAATTTGCAT 56428
Score = 100 bits (110), Expect = 7e-16
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || | ||| | |||||| | ||| | || ||| ||||| ||||| || ||||
Sbjct 38759 CCTCCCCTGAGCCGAAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAACCGGCT 38700
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363
| || || || ||||| |||||||||||||||| || || |||||||| ||||
Sbjct 38699 AAGGTTCGCCCATCTTCCTATTGTTTTCCTGCGAAAATTAGGCGCTGTTG---ATCTGGG 38643
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| ||| | || || || ||||| || ||||| | || || | ||| | ||
Sbjct 38642 GGGATCCCTCCCTTGTCTTGAATTTTTGCCTTCACATGCTCAATTGTATCCGAAGGCTCA 38583
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || ||||| | || || ||||| ||||| || |||||
Sbjct 38582 ACCTCAAGAGTAATAGTCTTGCGCGTTAGGGTCTTAACGAAAATTTGCAT 38533
>seq4530
Length=49833
Score = 100 bits (110), Expect = 7e-16
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || | ||| | |||||| | ||| | || ||| ||||| ||||| || ||||
Sbjct 18533 CCTCCCCTGAGCCGAAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAACCGGCT 18474
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363
| || || || ||||| |||||||||||||||| || || |||||||| ||||
Sbjct 18473 AAGGTTCGCCCATCTTCCTATTGTTTTCCTGCGAAAATTAGGCGCTGTTG---ATCTGGG 18417
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| ||| | || || || ||||| || ||||| | || || | ||| | ||
Sbjct 18416 GGGATCCCTCCCTTGTCTTGAATTTTTGCCTTCACATGCTCAATTGTATCCGAAGGCTCA 18357
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || ||||| | || || ||||| ||||| || |||||
Sbjct 18356 ACCTCAAGAGTAATAGTCTTGCGCGTTAGGGTCTTAACGAAAATTTGCAT 18307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178344441712260
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