Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq13731 140 3e-28
seq76387 134 1e-26
seq280 132 5e-26
seq322 123 2e-23
seq28390 109 5e-19
seq21746 100 3e-16
seq4530 100 3e-16
seq2574 84.2 2e-11
>seq13731
Length=15303
Score = 140 bits (154), Expect = 3e-28
Identities = 366/556 (66%), Gaps = 7/556 (1%)
Strand=Plus/Plus
Query 154587 GACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCAC 154646
|| || |||||||| || || | || |||| | |||| |||||||| | |||
Sbjct 1478 GATGCTAAGTTGCATACAGCCACCTCATCAGGTGCAGAATATTCGACAATTTCAGTGCAT 1537
Query 154647 AAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCT 154706
| ||| |||||| ||||||||| | |||| |||||| ||| | || || || ||
Sbjct 1538 AGATTGCTGCATTTAATGGTGCCAATATTTTGCTGATTACTTTTTCTATTACAGGCATCC 1597
Query 154707 TTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAACA-- 154764
|||||||| || || || || || || ||||| |||| |||||| || | |||| ||
Sbjct 1598 TTGTACAACATATAAGGTGTACCGGTCTCCACCTGGGATTCAATGATGG--CGAACCAAA 1655
Query 154765 GACTTCGCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTT 154824
||||| | || | || | || || ||| | ||||| | | || | ||
Sbjct 1656 GACTTTGAGCTTTCACCGTCTTATTAGCGCGTCCTTCCTTTTCATACTTTGTATATAATT 1715
Query 154825 TTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATG 154884
|||| || ||| | | || || || || ||||| | |||||||||||||
Sbjct 1716 TTTCGAATTCTTCGCCCCAAACCTCATGTAAGCCAGGACATTTATGTGGACACATCAATG 1775
Query 154885 ACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACA 154944
||||| | |||| || || |||| ||| || ||||| || | ||||||||| || |
Sbjct 1776 ACCACTCTCCGTTAGCTTCCACACGTTCCATGAATAAATCTGGTATCCACAAAGCATAAA 1835
Query 154945 ACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCAT 155004
| ||||| | || | ||||| || | || ||| |||| |||||| |||
Sbjct 1836 ATAAATCTCTGGCTCGGTGCTCTTCTTTTCCAGTATTCTTCTTCAAATCCAAAAACTCAA 1895
Query 155005 ATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTT---TCCTC 155061
| || || || ||||| || || || || | ||| | ||||| || || || |
Sbjct 1896 AAATATCTGCATGCCATGGTTCCAAGTAAATGGCAAAGGCGCCAGGCCGCTTGCCACCAC 1955
Query 155062 CTTGATCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGG 155121
| ||||| |||| ||| || |||||| | || ||||||| |||| ||| || | |
Sbjct 1956 CCTGATCTACGTAACGTGCAACGTTATTGAATACCCGCAACATTGGTACCAAACCATTTG 2015
Query 155122 CCGTGCCGTTGGTGCC 155137
||||| || |||||
Sbjct 2016 AAGTGCCATTTGTGCC 2031
>seq76387
Length=1185
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||||| | ||| || || || | || || || ||||| |||||||| || | |
Sbjct 189 CCGCCGCGCAGACGAAGGACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCCGAG 248
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||||| |||| || ||||||||||| || | || || ||||||||||| || |||
Sbjct 249 AGGGTGCGCCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGA 308
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || || || ||||| || || ||| ||| ||| | || || | || |||||
Sbjct 309 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACC 368
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||| | ||||||||||| | || || ||||| || |||||
Sbjct 369 TCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 415
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | ||||| || |||| || || || || || ||||||||||| |
Sbjct 761 ACCACCGCGCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 820
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| |||||| |||| || |||||||| || || | ||||| ||||||||||| || ||
Sbjct 821 GAGGGTGCGACCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 880
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| ||| ||| | ||||| | || |||||
Sbjct 881 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTATCGCTGGGCTCCAC 940
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||||||| | || || || || || |||||
Sbjct 941 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 988
Score = 109 bits (120), Expect = 5e-19
Identities = 137/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315
||||| |||||||| || || |||||| |||| || || |||||||| || | |||
Sbjct 573 TTTTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCCTCGAGTTGCTTGCCAGCGAAGATG 632
Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375
|| ||||||||||| || ||||| || || || ||||| || || ||| ||| |||
Sbjct 633 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCA 692
Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435
| || || | || ||||| || | ||| | ||||||||||| | || || |||||
Sbjct 693 ATGGTGTCGCTGGGCTCCACCTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTAACGAAG 752
Query 64436 ATTTGCAT 64443
|| |||||
Sbjct 753 ATCTGCAT 760
>seq280
Length=341618
Score = 132 bits (146), Expect = 5e-26
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || ||||||| || || || ||||| ||||||||||| | | |||||| ||||
Sbjct 106495 AAGAACCAGATGAAGTGTAGACTCCTTTTGGATGTTGTAATCGGACAAGGTGCGTCCGTC 106554
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||| | || ||||||||| | || | || ||||| || || ||||| || ||||| ||
Sbjct 106555 TTCCAATTGTTTGCCGGCAAAGATTAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTC 106614
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| || || |||||| ||| | ||||| | || || || | ||| | |||
Sbjct 106615 TTGAATCTTGGCTTTTACATTCTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGT 106674
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| |||||||| || ||||| |||||||||||
Sbjct 106675 CTTGCCAGTCAAAGTCTTCACGAAGATTTGCATTTT 106710
Score = 132 bits (146), Expect = 5e-26
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || ||||||| || || || ||||| ||||||||||| | | |||||| ||||
Sbjct 114741 AAGAACCAGATGAAGTGTAGACTCCTTTTGGATGTTGTAATCGGACAAGGTGCGTCCGTC 114800
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||| | || ||||||||| | || | || ||||| || || ||||| || ||||| ||
Sbjct 114801 TTCCAATTGTTTGCCGGCAAAGATTAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTC 114860
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| || || |||||| ||| | ||||| | || || || | ||| | |||
Sbjct 114861 TTGAATCTTGGCTTTTACATTCTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGT 114920
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| |||||||| || ||||| |||||||||||
Sbjct 114921 CTTGCCAGTCAAAGTCTTCACGAAGATTTGCATTTT 114956
Score = 111 bits (122), Expect = 2e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| |||| ||| | || || |||||||| ||||| ||||| | | |||||| | |||
Sbjct 106040 AGGACTAAATGCAGGGTAGACTCTTTTTGTATGTTATAATCGGACAAGGTGCGGCCATCT 106099
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||||||||| | || | ||||| || || || || || ||||| || |||
Sbjct 106100 TCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGGATACCTTCCTTATCT 106159
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | |||| ||||| ||| || | ||||| | || || || | ||| | |||
Sbjct 106160 TGGA-TTTTGGCTTTCACATTTTCGATAGTATCGGAAGGTTCAACCTCCAGAGTGATGGT 106218
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| ||||| ||||| || || ||||||||
Sbjct 106219 TTTGCCAGTCAATGTTTTAACAAATATTTGCAT 106251
Score = 111 bits (122), Expect = 2e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| |||| ||| | || || |||||||| ||||| ||||| | | |||||| | |||
Sbjct 114286 AGGACTAAATGCAGGGTAGACTCTTTTTGTATGTTATAATCGGACAAGGTGCGGCCATCT 114345
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||||||||| | || | ||||| || || || || || ||||| || |||
Sbjct 114346 TCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGGATACCTTCCTTATCT 114405
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | |||| ||||| ||| || | ||||| | || || || | ||| | |||
Sbjct 114406 TGGA-TTTTGGCTTTCACATTTTCGATAGTATCGGAAGGTTCAACCTCCAGAGTGATGGT 114464
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| ||||| ||||| || || ||||||||
Sbjct 114465 TTTGCCAGTCAATGTTTTAACAAATATTTGCAT 114497
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|||| ||| | || ||||| || ||||| ||||| || | | ||||| | || ||
Sbjct 106271 ACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGACAATGTGCGTCCATCCTCC 106330
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
| ||||||||| || |||| | || || || || || || |||||||| || || ||
Sbjct 106331 AACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCCTGA 106390
Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413
||||| ||||| ||| ||| | ||||| | || || || | ||| | ||| ||
Sbjct 106391 ATTTTA-GCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTT 106449
Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||||||||| |||||||| |||||
Sbjct 106450 ACCCGTCAAAGTTTTGACGAAAATCTGCAT 106479
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|||| ||| | || ||||| || ||||| ||||| || | | ||||| | || ||
Sbjct 114517 ACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGACAATGTGCGTCCATCCTCC 114576
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
| ||||||||| || |||| | || || || || || || |||||||| || || ||
Sbjct 114577 AACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCCTGA 114636
Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413
||||| ||||| ||| ||| | ||||| | || || || | ||| | ||| ||
Sbjct 114637 ATTTTA-GCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTT 114695
Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||||||||| |||||||| |||||
Sbjct 114696 ACCCGTCAAAGTTTTGACGAAAATCTGCAT 114725
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | | || || | ||| | || || || ||||| ||||| ||||| |
Sbjct 104884 ACCACCGCGAAGACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTATAATCGGA 104943
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | ||||| |||||||||||||| | || | ||||| || || || ||
Sbjct 104944 CAAAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGG 105003
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATC-ACCGGCGTCCA 64394
|| |||||||| || || || || ||| || ||| | || || |||| || |
Sbjct 105004 GATACCTTCTTTGTCCTGGATCTTGGCCTTAACGTTCTCGATGGTGTCTGACGGC-TCAA 105062
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || | || | ||| ||||| |||| ||| || ||||||||||||||
Sbjct 105063 CCTCCAAGGTGATGGTTTTGCCAGTCAGAGTCTTGACGAAAATTTGCAT 105111
Score = 84.2 bits (92), Expect = 2e-11
Identities = 92/121 (76%), Gaps = 1/121 (1%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || ||||| |||||||| || | | |||||| | ||||||||||| ||||||
Sbjct 105827 GTAGACTCCTTTTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCAAGCTGTTTGCCG 105886
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || | |||||||| || || ||||| ||||| || ||||| | | || |||||
Sbjct 105887 GCGAAGATCAAACGCTGCTGATCTGGGGGAATACCTTCCTTATCTTGGA-TCTTGGCTTT 105945
Query 64367 A 64367
|
Sbjct 105946 A 105946
Score = 84.2 bits (92), Expect = 2e-11
Identities = 92/121 (76%), Gaps = 1/121 (1%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || ||||| |||||||| || | | |||||| | ||||||||||| ||||||
Sbjct 114073 GTAGACTCCTTTTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCAAGCTGTTTGCCG 114132
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || | |||||||| || || ||||| ||||| || ||||| | | || |||||
Sbjct 114133 GCGAAGATCAAACGCTGCTGATCTGGGGGAATACCTTCCTTATCTTGGA-TCTTGGCTTT 114191
Query 64367 A 64367
|
Sbjct 114192 A 114192
>seq322
Length=316913
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| |||| ||| | || ||||| |||||||| |||||||| || | ||| ||| | ||
Sbjct 56216 AAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAATCGGCTAAGGTTCGCCCATC 56275
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||| | ||||| || || |||| || ||||| || || ||||| || ||||| || ||
Sbjct 56276 TTCTAATTGCTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGAGGGATCCCTTCCTTGTC 56335
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| ||||| ||| ||| ||| | |||||| | || || || | ||| | ||
Sbjct 56336 TTGAATTTTCGCCTTAACATGCTCAATTGTATCCGAAGGCTCAACCTCAAGAGTAATAGT 56395
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||| || | || || ||||||||||||||
Sbjct 56396 CTTGCCCGTTAGGGTCTTAACGAAAATTTGCAT 56428
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| |||| ||| | || ||||| |||||||| |||||| | || | ||| ||| | ||
Sbjct 38745 AAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAACCGGCTAAGGTTCGCCCATC 38686
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||| || || || || |||| || ||||| || || || || || ||| | || ||
Sbjct 38685 TTCCTATTGTTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGGGGGATCCCTCCCTTGTC 38626
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| |||||| ||| ||| ||| | |||||| | || || || | ||| | ||
Sbjct 38625 TTGAATTTTTGCCTTCACATGCTCAATTGTATCCGAAGGCTCAACCTCAAGAGTAATAGT 38566
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || | || || ||||||||||||||
Sbjct 38565 CTTGCGCGTTAGGGTCTTAACGAAAATTTGCAT 38533
>seq28390
Length=4902
Score = 109 bits (120), Expect = 5e-19
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || || ||||| || | | |||||| |||| || ||||| || |||
Sbjct 504 GTCGACTCCTTCTGGATATTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGTTTACCG 445
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | ||||| ||||||||||||||||| || || || || || || || ||| |||
Sbjct 444 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTC 385
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| ||| | |||||| || || || || | || | ||||||||| || | ||
Sbjct 384 ACATTCTCGATCGTATCAGAGGGCTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTC 325
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| || || |||||||| ||
Sbjct 324 TTCACAAAGATTTGCATGTT 305
>seq21746
Length=7614
Score = 100 bits (110), Expect = 3e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || |||||||||||||| || | | || || | ||||| | |||||||||
Sbjct 2392 GTTGACTCCTTTTGAATGTTGTAGTCGGACAAAGTACGACCATCTTCCAATTGCTTGCCG 2333
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| |||| | || || || || || || || |||||||| ||||| ||||| |||
Sbjct 2332 GCGAAAATCAAACGTTGTTGATCTGGTGGTATACCTTCTTTATCTTGGATTTTAGCCTTG 2273
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || ||| | || || || | ||| | ||||||||| || | |||
Sbjct 2272 ACATTTTCGATAGTGTCAGAAGGCTCGACCTCCAAAGTGATGGTCTTGCCCGTAAGTGTT 2213
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| |||||||| ||||||||
Sbjct 2212 TTGACGAAAATCTGCATTTT 2193
>seq4530
Length=49833
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| |||| ||| | || ||||| |||||||| |||||| | || | ||| ||| | ||
Sbjct 18519 AAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAACCGGCTAAGGTTCGCCCATC 18460
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||| || || || || |||| || ||||| || || || || || ||| | || ||
Sbjct 18459 TTCCTATTGTTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGGGGGATCCCTCCCTTGTC 18400
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| |||||| ||| ||| ||| | |||||| | || || || | ||| | ||
Sbjct 18399 TTGAATTTTTGCCTTCACATGCTCAATTGTATCCGAAGGCTCAACCTCAAGAGTAATAGT 18340
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || | || || ||||||||||||||
Sbjct 18339 CTTGCGCGTTAGGGTCTTAACGAAAATTTGCAT 18307
>seq2574
Length=80092
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315
|| || |||||||| || | || || |||| || |||||||||||||| | ||
Sbjct 58862 TTCTGGATGTTGTAGTCGCTCAGCGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 58921
Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375
|| ||||||||||| || || || || || || || || || || ||| ||| |||
Sbjct 58922 AGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCG 58981
Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435
| || || | || ||||| || | || | ||||||||| || | || || |||||
Sbjct 58982 ATGGTGTCGCTGGGCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 59041
Query 64436 ATTTGCATTTT 64446
|| ||||| ||
Sbjct 59042 ATCTGCATCTT 59052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499103497314800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |