Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq13731 140 3e-28 seq76387 134 1e-26 seq280 132 5e-26 seq322 123 2e-23 seq28390 109 5e-19 seq21746 100 3e-16 seq4530 100 3e-16 seq2574 84.2 2e-11 >seq13731 Length=15303 Score = 140 bits (154), Expect = 3e-28 Identities = 366/556 (66%), Gaps = 7/556 (1%) Strand=Plus/Plus Query 154587 GACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCAC 154646 || || |||||||| || || | || |||| | |||| |||||||| | ||| Sbjct 1478 GATGCTAAGTTGCATACAGCCACCTCATCAGGTGCAGAATATTCGACAATTTCAGTGCAT 1537 Query 154647 AAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCT 154706 | ||| |||||| ||||||||| | |||| |||||| ||| | || || || || Sbjct 1538 AGATTGCTGCATTTAATGGTGCCAATATTTTGCTGATTACTTTTTCTATTACAGGCATCC 1597 Query 154707 TTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAACA-- 154764 |||||||| || || || || || || ||||| |||| |||||| || | |||| || Sbjct 1598 TTGTACAACATATAAGGTGTACCGGTCTCCACCTGGGATTCAATGATGG--CGAACCAAA 1655 Query 154765 GACTTCGCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTT 154824 ||||| | || | || | || || ||| | ||||| | | || | || Sbjct 1656 GACTTTGAGCTTTCACCGTCTTATTAGCGCGTCCTTCCTTTTCATACTTTGTATATAATT 1715 Query 154825 TTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATG 154884 |||| || ||| | | || || || || ||||| | ||||||||||||| Sbjct 1716 TTTCGAATTCTTCGCCCCAAACCTCATGTAAGCCAGGACATTTATGTGGACACATCAATG 1775 Query 154885 ACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACA 154944 ||||| | |||| || || |||| ||| || ||||| || | ||||||||| || | Sbjct 1776 ACCACTCTCCGTTAGCTTCCACACGTTCCATGAATAAATCTGGTATCCACAAAGCATAAA 1835 Query 154945 ACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCAT 155004 | ||||| | || | ||||| || | || ||| |||| |||||| ||| Sbjct 1836 ATAAATCTCTGGCTCGGTGCTCTTCTTTTCCAGTATTCTTCTTCAAATCCAAAAACTCAA 1895 Query 155005 ATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTT---TCCTC 155061 | || || || ||||| || || || || | ||| | ||||| || || || | Sbjct 1896 AAATATCTGCATGCCATGGTTCCAAGTAAATGGCAAAGGCGCCAGGCCGCTTGCCACCAC 1955 Query 155062 CTTGATCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGG 155121 | ||||| |||| ||| || |||||| | || ||||||| |||| ||| || | | Sbjct 1956 CCTGATCTACGTAACGTGCAACGTTATTGAATACCCGCAACATTGGTACCAAACCATTTG 2015 Query 155122 CCGTGCCGTTGGTGCC 155137 ||||| || ||||| Sbjct 2016 AAGTGCCATTTGTGCC 2031 >seq76387 Length=1185 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||||| | ||| || || || | || || || ||||| |||||||| || | | Sbjct 189 CCGCCGCGCAGACGAAGGACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCCGAG 248 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||||| |||| || ||||||||||| || | || || ||||||||||| || ||| Sbjct 249 AGGGTGCGCCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGA 308 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || ||||| || || ||| ||| ||| | || || | || ||||| Sbjct 309 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACC 368 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | ||||||||||| | || || ||||| || ||||| Sbjct 369 TCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 415 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||||| || |||| || || || || || ||||||||||| | Sbjct 761 ACCACCGCGCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 820 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || |||||||| || || | ||||| ||||||||||| || || Sbjct 821 GAGGGTGCGACCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 880 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| ||| | ||||| | || ||||| Sbjct 881 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTATCGCTGGGCTCCAC 940 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||| | || || || || || ||||| Sbjct 941 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 988 Score = 109 bits (120), Expect = 5e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 ||||| |||||||| || || |||||| |||| || || |||||||| || | ||| Sbjct 573 TTTTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCCTCGAGTTGCTTGCCAGCGAAGATG 632 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 || ||||||||||| || ||||| || || || ||||| || || ||| ||| ||| Sbjct 633 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCA 692 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 | || || | || ||||| || | ||| | ||||||||||| | || || ||||| Sbjct 693 ATGGTGTCGCTGGGCTCCACCTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTAACGAAG 752 Query 64436 ATTTGCAT 64443 || ||||| Sbjct 753 ATCTGCAT 760 >seq280 Length=341618 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||||| || || || ||||| ||||||||||| | | |||||| |||| Sbjct 106495 AAGAACCAGATGAAGTGTAGACTCCTTTTGGATGTTGTAATCGGACAAGGTGCGTCCGTC 106554 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | || ||||||||| | || | || ||||| || || ||||| || ||||| || Sbjct 106555 TTCCAATTGTTTGCCGGCAAAGATTAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTC 106614 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || |||||| ||| | ||||| | || || || | ||| | ||| Sbjct 106615 TTGAATCTTGGCTTTTACATTCTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGT 106674 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||||| |||||||| || ||||| ||||||||||| Sbjct 106675 CTTGCCAGTCAAAGTCTTCACGAAGATTTGCATTTT 106710 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||||| || || || ||||| ||||||||||| | | |||||| |||| Sbjct 114741 AAGAACCAGATGAAGTGTAGACTCCTTTTGGATGTTGTAATCGGACAAGGTGCGTCCGTC 114800 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | || ||||||||| | || | || ||||| || || ||||| || ||||| || Sbjct 114801 TTCCAATTGTTTGCCGGCAAAGATTAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTC 114860 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || |||||| ||| | ||||| | || || || | ||| | ||| Sbjct 114861 TTGAATCTTGGCTTTTACATTCTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGT 114920 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||||| |||||||| || ||||| ||||||||||| Sbjct 114921 CTTGCCAGTCAAAGTCTTCACGAAGATTTGCATTTT 114956 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || |||| ||| | || || |||||||| ||||| ||||| | | |||||| | ||| Sbjct 106040 AGGACTAAATGCAGGGTAGACTCTTTTTGTATGTTATAATCGGACAAGGTGCGGCCATCT 106099 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | || | ||||| || || || || || ||||| || ||| Sbjct 106100 TCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGGATACCTTCCTTATCT 106159 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | |||| ||||| ||| || | ||||| | || || || | ||| | ||| Sbjct 106160 TGGA-TTTTGGCTTTCACATTTTCGATAGTATCGGAAGGTTCAACCTCCAGAGTGATGGT 106218 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| ||||| ||||| || || |||||||| Sbjct 106219 TTTGCCAGTCAATGTTTTAACAAATATTTGCAT 106251 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || |||| ||| | || || |||||||| ||||| ||||| | | |||||| | ||| Sbjct 114286 AGGACTAAATGCAGGGTAGACTCTTTTTGTATGTTATAATCGGACAAGGTGCGGCCATCT 114345 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | || | ||||| || || || || || ||||| || ||| Sbjct 114346 TCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGGATACCTTCCTTATCT 114405 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | |||| ||||| ||| || | ||||| | || || || | ||| | ||| Sbjct 114406 TGGA-TTTTGGCTTTCACATTTTCGATAGTATCGGAAGGTTCAACCTCCAGAGTGATGGT 114464 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| ||||| ||||| || || |||||||| Sbjct 114465 TTTGCCAGTCAATGTTTTAACAAATATTTGCAT 114497 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| ||| | || ||||| || ||||| ||||| || | | ||||| | || || Sbjct 106271 ACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGACAATGTGCGTCCATCCTCC 106330 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | ||||||||| || |||| | || || || || || || |||||||| || || || Sbjct 106331 AACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCCTGA 106390 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 ||||| ||||| ||| ||| | ||||| | || || || | ||| | ||| || Sbjct 106391 ATTTTA-GCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTT 106449 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||||||||| |||||||| ||||| Sbjct 106450 ACCCGTCAAAGTTTTGACGAAAATCTGCAT 106479 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| ||| | || ||||| || ||||| ||||| || | | ||||| | || || Sbjct 114517 ACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGACAATGTGCGTCCATCCTCC 114576 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | ||||||||| || |||| | || || || || || || |||||||| || || || Sbjct 114577 AACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCCTGA 114636 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 ||||| ||||| ||| ||| | ||||| | || || || | ||| | ||| || Sbjct 114637 ATTTTA-GCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTT 114695 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||||||||| |||||||| ||||| Sbjct 114696 ACCCGTCAAAGTTTTGACGAAAATCTGCAT 114725 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || | ||| | || || || ||||| ||||| ||||| | Sbjct 104884 ACCACCGCGAAGACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTATAATCGGA 104943 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | ||||| |||||||||||||| | || | ||||| || || || || Sbjct 104944 CAAAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGG 105003 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATC-ACCGGCGTCCA 64394 || |||||||| || || || || ||| || ||| | || || |||| || | Sbjct 105004 GATACCTTCTTTGTCCTGGATCTTGGCCTTAACGTTCTCGATGGTGTCTGACGGC-TCAA 105062 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | ||| ||||| |||| ||| || |||||||||||||| Sbjct 105063 CCTCCAAGGTGATGGTTTTGCCAGTCAGAGTCTTGACGAAAATTTGCAT 105111 Score = 84.2 bits (92), Expect = 2e-11 Identities = 92/121 (76%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || ||||| |||||||| || | | |||||| | ||||||||||| |||||| Sbjct 105827 GTAGACTCCTTTTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCAAGCTGTTTGCCG 105886 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | |||||||| || || ||||| ||||| || ||||| | | || ||||| Sbjct 105887 GCGAAGATCAAACGCTGCTGATCTGGGGGAATACCTTCCTTATCTTGGA-TCTTGGCTTT 105945 Query 64367 A 64367 | Sbjct 105946 A 105946 Score = 84.2 bits (92), Expect = 2e-11 Identities = 92/121 (76%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || ||||| |||||||| || | | |||||| | ||||||||||| |||||| Sbjct 114073 GTAGACTCCTTTTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCAAGCTGTTTGCCG 114132 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | |||||||| || || ||||| ||||| || ||||| | | || ||||| Sbjct 114133 GCGAAGATCAAACGCTGCTGATCTGGGGGAATACCTTCCTTATCTTGGA-TCTTGGCTTT 114191 Query 64367 A 64367 | Sbjct 114192 A 114192 >seq322 Length=316913 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| |||| ||| | || ||||| |||||||| |||||||| || | ||| ||| | || Sbjct 56216 AAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAATCGGCTAAGGTTCGCCCATC 56275 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | ||||| || || |||| || ||||| || || ||||| || ||||| || || Sbjct 56276 TTCTAATTGCTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGAGGGATCCCTTCCTTGTC 56335 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| ||||| ||| ||| ||| | |||||| | || || || | ||| | || Sbjct 56336 TTGAATTTTCGCCTTAACATGCTCAATTGTATCCGAAGGCTCAACCTCAAGAGTAATAGT 56395 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | || || |||||||||||||| Sbjct 56396 CTTGCCCGTTAGGGTCTTAACGAAAATTTGCAT 56428 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| |||| ||| | || ||||| |||||||| |||||| | || | ||| ||| | || Sbjct 38745 AAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAACCGGCTAAGGTTCGCCCATC 38686 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| || || || || |||| || ||||| || || || || || ||| | || || Sbjct 38685 TTCCTATTGTTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGGGGGATCCCTCCCTTGTC 38626 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| |||||| ||| ||| ||| | |||||| | || || || | ||| | || Sbjct 38625 TTGAATTTTTGCCTTCACATGCTCAATTGTATCCGAAGGCTCAACCTCAAGAGTAATAGT 38566 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || |||||||||||||| Sbjct 38565 CTTGCGCGTTAGGGTCTTAACGAAAATTTGCAT 38533 >seq28390 Length=4902 Score = 109 bits (120), Expect = 5e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || || ||||| || | | |||||| |||| || ||||| || ||| Sbjct 504 GTCGACTCCTTCTGGATATTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGTTTACCG 445 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||||||||| || || || || || || || ||| ||| Sbjct 444 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTC 385 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | |||||| || || || || | || | ||||||||| || | || Sbjct 384 ACATTCTCGATCGTATCAGAGGGCTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTC 325 Query 64427 TTTACGAAAATTTGCATTTT 64446 || || || |||||||| || Sbjct 324 TTCACAAAGATTTGCATGTT 305 >seq21746 Length=7614 Score = 100 bits (110), Expect = 3e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || |||||||||||||| || | | || || | ||||| | ||||||||| Sbjct 2392 GTTGACTCCTTTTGAATGTTGTAGTCGGACAAAGTACGACCATCTTCCAATTGCTTGCCG 2333 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| | || || || || || || || |||||||| ||||| ||||| ||| Sbjct 2332 GCGAAAATCAAACGTTGTTGATCTGGTGGTATACCTTCTTTATCTTGGATTTTAGCCTTG 2273 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || ||| | || || || | ||| | ||||||||| || | ||| Sbjct 2272 ACATTTTCGATAGTGTCAGAAGGCTCGACCTCCAAAGTGATGGTCTTGCCCGTAAGTGTT 2213 Query 64427 TTTACGAAAATTTGCATTTT 64446 || |||||||| |||||||| Sbjct 2212 TTGACGAAAATCTGCATTTT 2193 >seq4530 Length=49833 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| |||| ||| | || ||||| |||||||| |||||| | || | ||| ||| | || Sbjct 18519 AAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAACCGGCTAAGGTTCGCCCATC 18460 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| || || || || |||| || ||||| || || || || || ||| | || || Sbjct 18459 TTCCTATTGTTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGGGGGATCCCTCCCTTGTC 18400 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| |||||| ||| ||| ||| | |||||| | || || || | ||| | || Sbjct 18399 TTGAATTTTTGCCTTCACATGCTCAATTGTATCCGAAGGCTCAACCTCAAGAGTAATAGT 18340 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || |||||||||||||| Sbjct 18339 CTTGCGCGTTAGGGTCTTAACGAAAATTTGCAT 18307 >seq2574 Length=80092 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || || |||||||| || | || || |||| || |||||||||||||| | || Sbjct 58862 TTCTGGATGTTGTAGTCGCTCAGCGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 58921 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 || ||||||||||| || || || || || || || || || || ||| ||| ||| Sbjct 58922 AGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCG 58981 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 | || || | || ||||| || | || | ||||||||| || | || || ||||| Sbjct 58982 ATGGTGTCGCTGGGCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 59041 Query 64436 ATTTGCATTTT 64446 || ||||| || Sbjct 59042 ATCTGCATCTT 59052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499103497314800