Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_010583.1
Length=111382
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 120 2e-22
seq85787 105 5e-18
>seq81708
Length=1085
Score = 120 bits (132), Expect = 2e-22
Identities = 131/172 (76%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 29172 GTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGCGTCAGTGCATTAAATCGAACA 29231
|||||||||||| ||||||| || ||| || || ||||||| || ||||| || ||
Sbjct 251 GTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCAGCGCGTTAAAGCGCACG 310
Query 29232 GCATAGCCAGAGACACGAATGGTCAACTGAGGGTATTTTTCAGGATGTTTCTGTGCATC- 29290
|||||||| || || |||||||||||||| || |||||||| ||||| ||| |||||
Sbjct 311 GCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCGGATGGTTCACGGCATCT 370
Query 29291 -CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTCCCTC 29341
| || | | ||||||| | || || || || ||||||||||| || ||
Sbjct 371 TCCAACGTT--TCACGACGCAGTACGTTTACGTTCAGGTGCTGACCACCTTC 420
>seq85787
Length=1013
Score = 105 bits (116), Expect = 5e-18
Identities = 135/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 29158 ATTATATCGCCTGAGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGCGTCAGTG 29217
|||| | || ||| || || ||||| |||| || || ||||| || || || || |
Sbjct 588 ATTACAACGACTGGGTGAAAGTACGTGTAATTACATCTTTCTGCTGCTCTTTAGTGAGCG 647
Query 29218 CATTAAATCGAACAGCATAGCCAGAGACACGAATGGTCAACTGAGGGTATTTTTCAGGAT 29277
|| || || |||||||||||||| || || ||||||| ||| || ||||| || ||||
Sbjct 648 AGTTGAAGCGTACAGCATAGCCAGAAACGCGGATGGTCAGCTGCGGATATTTCTCCGGAT 707
Query 29278 GTTTCTGTGCATCCAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTC 29337
||| | |||||||| ||| |||||| | | || ||||| || || || ||||| |
Sbjct 708 GTTCCATGGCATCCAACAGCATCTCACGATTCATTACGTTGACGTTCAGATGTTGACCAC 767
Query 29338 CCTCGA 29343
| ||||
Sbjct 768 CTTCGA 773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355921246185410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |