Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq3597 84.2 2e-11 >seq3597 Length=60788 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 118179 CCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTG 118238 || ||||| || || || ||| ||| || ||||| || || | | ||| |||| | Sbjct 59083 CCATCGCGTCCCGCTCTCCCTGCCTCCTGGTAATAGCCTTCAATAGCTTTTGGCAGAGAA 59142 Query 118239 TGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCGAA 118298 | |||| ||| || || || || |||||||| |||||||| || || ||||| |||| | Sbjct 59143 TAGTGTAGCACAAAACGTACATCAGGTTTATCAATGCCCATACCAAATGCTATTGTCGCA 59202 Query 118299 CATATCACTCG 118309 ||||||||||| Sbjct 59203 CATATCACTCG 59213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369536970480