Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq32170 197 1e-45
seq40302 178 1e-39
seq280 131 2e-25
seq21746 122 9e-23
seq76387 111 2e-19
seq8352 100 3e-16
seq2574 95.1 1e-14
seq22380 93.3 4e-14
seq322 86.0 6e-12
>seq32170
Length=3971
Score = 197 bits (218), Expect = 1e-45
Identities = 339/485 (70%), Gaps = 13/485 (3%)
Strand=Plus/Minus
Query 153785 CTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTC 153844
||| || |||||| | || ||||| ||| |||||| ||||||||| |||
Sbjct 3955 CTGGGCGCGCACCTGTCGCTTGTAGCGCTTCTCCGCCTCGTACTTCTCGTACAGCTCCTC 3896
Query 153845 AAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCA 153904
||| | ||||| ||||||| |||||||| |||| ||||| ||||||||||||||
Sbjct 3895 AAAGGCCTCGCCCCAGCAGTCCTGCAGGCCGGGGCACTCGTGCGGGCACATCAGCGACCA 3836
Query 153905 CATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAG 153964
| |||| || | |||||| ||| || || ||||||||||| | ||||| | |||
Sbjct 3835 GACGCCGTCCGCCTGGACGCGCTTCATAAAGAGGTCCGGCACCCACATGGCGTAGAAGAG 3776
Query 153965 GTCGCGCGCCTTGCAATCCTCCGCGCCCATG---TTGCGTTTCAGATTGAG-CACGCTAT 154020
|||||| || | ||||||| ||| || ||||| ||| | ||| || | |
Sbjct 3775 GTCGCGGGCACGGAGCTCCTCCGAGCCGGTGTTCTTGCG---CAGGTCGAGAAACTCGA- 3720
Query 154021 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGC 154077
|||||||||||||||| ||||| | ||||| ||| | || || ||| || ||||
Sbjct 3719 AGATGTCGGCGTGCCACGGTTCGAGGTAGATGGCAAACGCCCCCGGGCGCTTGTTCCCGC 3660
Query 154078 CCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTG 154137
|||| || |||| ||| | | |||||| ||||||||| ||| || ||| ||| |||
Sbjct 3659 CCTGGTCCACGTAGCGGGCGGTGTTGTTGTAGACGCGCAGCATCGGCACCA-GCCCATTG 3601
Query 154138 C-GGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACG 154196
| | |||||| || |||| | | |||| |||||| | |||||||| |||
Sbjct 3600 CTGACGCCGTTTGTGCCGCTGATGTAGGTGCCCGCGGCGCGGATGCAGTGCACGTTGACG 3541
Query 154197 CCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCG 154256
|||||||||||| | |||| || ||| ||||| | |||||| |||||||||
Sbjct 3540 CCAATGCCGCCGGCCGACTTGGAGATGATGGCGCACTGCTTCAGCGTGTCGTAGATGCCC 3481
Query 154257 TCGAT 154261
|| ||
Sbjct 3480 TCAAT 3476
>seq40302
Length=2817
Score = 178 bits (196), Expect = 1e-39
Identities = 507/759 (67%), Gaps = 28/759 (4%)
Strand=Plus/Minus
Query 52093 ACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGCATCGTGA 52152
|||||||| | |||||| ||||| |||| |||||||||||| ||| ||||||| |
Sbjct 2691 ACGAGCGCCACTTTATCTCCCACGTTCTGGCCTTCTTCGCCGCCAGCGACGGCATCGTCA 2632
Query 52153 ACATTAACCTCATCGAG---TACATGCAGCGGAACGTT-CCGGAACTCGAGGCGCAATAC 52208
| |||||| ||| | ||| | ||| | || ||| || |||||| | | |
Sbjct 2631 ATGAGAACCTCGCGGAGCGCTTCATCC-GCG--AGGTGACCGTCAC-CGAGGCCCGTTGC 2576
Query 52209 TTTTATAATTTGCA-AGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCTCAT 52267
|| || || || | ||| ||||||| ||| ||| ||||||||||| ||||| ||
Sbjct 2575 TTCTACGGCTTCCAGATTGC-CATCGAGAACGTCCACTCGGAGATGTACTCCCTGCTGAT 2517
Query 52268 TGAGCAGCTGATAAAAGATGAGCACG---AGCGCGACACGCTGCTGAATGCGTTCGAGCA 52324
| || || | | || || | || ||||||| || | || || || || |
Sbjct 2516 CAA-CACCT-ACATCAGC-GACCGCGTCCAGCGCGAGTACCTCTTCAACGCCATCCAG-A 2461
Query 52325 CG-TGCCGTGCGTTCGCAAA-AAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACC 52382
|| |||| ||||| ||| || ||||| ||||||| ||| |||| | ||| | |
Sbjct 2460 CGATGCCCTGCGT-CGCGAAGAAGGCGAAGTGGGCCATGGCCTGGACGGCCGCCGAAAAC 2402
Query 52383 G---CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCC 52439
| |||| | ||||||||| | || ||||||||| || |||||| | || || |
Sbjct 2401 GGCGCCACCTTTGCCGAGCGCCTCGTCGCCTTCGCCGCCGTGGAGGGCATCTTCTTCAGC 2342
Query 52440 GGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTC 52499
||| ||||||| |||||||| | || | | ||| | ||||| |||||||| |||
Sbjct 2341 GGCTCCTTTGCCAGCATCTTTTGGCTGAAGAAGCGCGGCCTGATGCCGGGCCTGACCTTC 2282
Query 52500 AGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTAC 52559
||||| ||| |||| |||||||| || |||||| |||||||| || ||| ||
Sbjct 2281 AGCAATGAGCTGATCAGCCGCGACGAGGGCCTGCACTGCGACTTTGCCTGTCTCCTCTTT 2222
Query 52560 AAGACGCG-CGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGC 52618
||| | ||| | || | | || | | || || |||| |||||
Sbjct 2221 ----CGCCACCTGATTAAGAAGCCGTACGATGAGCGGGTGGTGCAGATCATCAACGAGGC 2166
Query 52619 GGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA 52678
|| ||||| ||||||| | || | ||| || ||||||| || | ||||||||
Sbjct 2165 CGTCCGCATCGAGCAGGAGTTCCTCACTGACGCCCTTCCGGTCGCCCTCATTGGCATGAA 2106
Query 52679 CGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 52738
| || |||| | |||||| |||| || || || ||| ||||| |||||||
Sbjct 2105 CAACGAGCTGATGTCCACGTACATTGAGTACTGCGCCGACCGGCTGCTGGTGGAGCTCGG 2046
Query 52739 GCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGA 52798
||| ||||||| ||||| ||||| ||||| || ||| | | || || ||
Sbjct 2045 CGTGCCCAAGTACTACAACGTCAAGAATCCCTTTGACTTCATGGAGCAGATCAGCCTGGA 1986
Query 52799 GGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||| |||||||| || || |||||||| |||||||||||
Sbjct 1985 GGGAAAGACCAATTTCTTTGAGAAGCGCGTCGGCGAGTA 1947
>seq280
Length=341618
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||||| ||| || || | | ||||||||||| |||||||||||| |
Sbjct 105569 CCTCCGCGCAGACGCAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGAC 105628
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || || |||||||| || |||| |||||| |||||| || || |||||
Sbjct 105629 AAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGAGGA 105688
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || ||||| ||| || ||| | | || | |||||||| | ||| |||
Sbjct 105689 ATACCCTCCTTGTCCTGGATCTTAGCTTTGACGTTCTCAATGGTGTCGGATGGCTCAACC 105748
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | ||| | ||||||||||| || || || ||||| ||||||||
Sbjct 105749 TCCAACGTGATGGTTTTACCAGTTAGGGTCTTCACAAATATCTGCAT 105795
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||||| ||| || || | | ||||||||||| |||||||||||| |
Sbjct 113815 CCTCCGCGCAGACGCAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGAC 113874
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || || |||||||| || |||| |||||| |||||| || || |||||
Sbjct 113875 AAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGAGGA 113934
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || ||||| ||| || ||| | | || | |||||||| | ||| |||
Sbjct 113935 ATACCCTCCTTGTCCTGGATCTTAGCTTTGACGTTCTCAATGGTGTCGGATGGCTCAACC 113994
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | ||| | ||||||||||| || || || ||||| ||||||||
Sbjct 113995 TCCAACGTGATGGTTTTACCAGTTAGGGTCTTCACAAATATCTGCAT 114041
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||||| || ||||| | | | ||||||||||| ||||| || ||| |
Sbjct 104885 CCACCGCGAAGACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTATAATCGGAC 104944
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| || ||||| || || |||| |||||| ||||||||| || || ||
Sbjct 104945 AAAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGG 105004
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||||||||| ||| || || | | || | |||||| | || ||| |||
Sbjct 105005 ATACCTTCTTTGTCCTGGATCTTGGCCTTAACGTTCTCGATGGTGTCTGACGGCTCAACC 105064
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| ||||||||||| || || ||||| |||||
Sbjct 105065 TCCAAGGTGATGGTTTTGCCAGTCAGAGTCTTGACGAAAATTTGCAT 105111
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||||| || ||||| | | | ||||||||||| ||||||||||| |
Sbjct 105341 CCACCACGGAGACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAC 105400
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || ||| ||| ||||| || ||||| | | | || | ||| || ||||| |||||
Sbjct 105401 AAGGTGCGCCCGTCTTCGAGCTGCTTACCAGCAAAAATCAAACGTTGCTGGTCTGGAGGA 105460
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|||||||| ||||| ||| | || | || | | ||| | |||||||| | ||| ||
Sbjct 105461 ATACCTTCCTTGTC-TTGAATCTTGGCCTTGACGTTTTCAATGGTGTCGGATGGCTCAAC 105519
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | ||||| |||||||| || || || || || |||||
Sbjct 105520 CTCCAAGGTTATAGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 105567
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||||| || ||||| | | | ||||||||||| ||||||||||| |
Sbjct 105113 CCACCGCGAAGACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAC 105172
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||| || | ||||||||||| | || | ||| ||||| || |||||
Sbjct 105173 AAGGTGCGGCCGTCTTCCAATTGTTTACCGGCGAAAATCAAACGTTGTTGATCTGGAGGA 105232
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| |||||||| || ||| | || | || | | ||| | |||||| | || ||| ||
Sbjct 105233 ATGCCTTCTTTATC-TTGAATCTTGGCCTTGACGTTTTCGATGGTGTCTGACGGCTCAAC 105291
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | ||||||||||| || || || || || || |||||
Sbjct 105292 CTCCAAGGTGATGGTTTTACCAGTTAGGGTCTTCACGAAGATTTGCAT 105339
Score = 96.9 bits (106), Expect = 3e-15
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459
|||||||||||||| | | || ||||| ||||| |||||||| || || ||
Sbjct 106265 CGCAAAACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGACAATGTGCGTCCA 106324
Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519
||||| | || || || | | |||| ||| ||||| || || || || ||||| ||
Sbjct 106325 TCCTCCAACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTA 106384
Query 138520 TCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578
|| ||| |||| | ||| | | || | ||| |||| | ||| ||||| | || |
Sbjct 106385 TC-CTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGAT 106443
Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
|||||||| |||| |||||| || ||||||||||||
Sbjct 106444 GGTTTTACCCGTCAAAGTTTTGACGAAAATCTGCATG 106480
Score = 96.9 bits (106), Expect = 3e-15
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459
|||||||||||||| | | || ||||| ||||| |||||||| || || ||
Sbjct 114511 CGCAAAACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGACAATGTGCGTCCA 114570
Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519
||||| | || || || | | |||| ||| ||||| || || || || ||||| ||
Sbjct 114571 TCCTCCAACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTA 114630
Query 138520 TCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578
|| ||| |||| | ||| | | || | ||| |||| | ||| ||||| | || |
Sbjct 114631 TC-CTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGAT 114689
Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
|||||||| |||| |||||| || ||||||||||||
Sbjct 114690 GGTTTTACCCGTCAAAGTTTTGACGAAAATCTGCATG 114726
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || || | ||| | ||| | ||| | | ||||||||||| |||||||| |||
Sbjct 106480 GCCACCACGTAGACGAAGAACCAGATGAAGTGTAGACTCCTTTTGGATGTTGTAATCGGA 106539
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || || ||| || | |||||| |||| | |||||| ||| || || || || ||
Sbjct 106540 CAAGGTGCGTCCGTCTTCCAATTGTTTGCCGGCAAAGATTAAACGTTGCTGATCTGGTGG 106599
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
||||| |||||||| ||| | || | ||||| | || | || |||| | || |
Sbjct 106600 AATACCCTCTTTGTC-TTGAATCTTGGCTTTTACATTCTCAATAGTATCGGATGGTTCAA 106658
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | || || ||||||| ||| || || || || |||||
Sbjct 106659 CCTCCAGAGTGATGGTCTTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 106707
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || || | ||| | ||| | ||| | | ||||||||||| |||||||| |||
Sbjct 114726 GCCACCACGTAGACGAAGAACCAGATGAAGTGTAGACTCCTTTTGGATGTTGTAATCGGA 114785
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || || ||| || | |||||| |||| | |||||| ||| || || || || ||
Sbjct 114786 CAAGGTGCGTCCGTCTTCCAATTGTTTGCCGGCAAAGATTAAACGTTGCTGATCTGGTGG 114845
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
||||| |||||||| ||| | || | ||||| | || | || |||| | || |
Sbjct 114846 AATACCCTCTTTGTC-TTGAATCTTGGCTTTTACATTCTCAATAGTATCGGATGGTTCAA 114904
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | || || ||||||| ||| || || || || |||||
Sbjct 114905 CCTCCAGAGTGATGGTCTTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 114953
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||||| || ||||| | | ||||||||||| ||||||||||| |
Sbjct 105797 CCACCACGAAGACGCAGGACCAAATGCAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 105856
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || || || || ||||| |||| |||| | |||||| || || || ||
Sbjct 105857 AAGGTGCGGCCATCTTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 105916
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| || || ||| || ||| | | ||| | |||||| | | ||| |||
Sbjct 105917 ATACCTTCCTTATCTTGGATCTTGGCTTTAACATTTTCGATGGTGTCTGATGGCTCAACC 105976
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| ||||| || || || || || || |||||
Sbjct 105977 TCCAAGGTGATAGTTTTGCCAGTTAGGGTCTTCACGAAGATTTGCAT 106023
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||||| || ||||| | | ||||||||||| ||||||||||| |
Sbjct 114043 CCACCACGAAGACGCAGGACCAAATGCAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 114102
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || || || || ||||| |||| |||| | |||||| || || || ||
Sbjct 114103 AAGGTGCGGCCATCTTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 114162
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| || || ||| || ||| | | ||| | |||||| | | ||| |||
Sbjct 114163 ATACCTTCCTTATCTTGGATCTTGGCTTTAACATTTTCGATGGTGTCTGATGGCTCAACC 114222
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| ||||| || || || || || || |||||
Sbjct 114223 TCCAAGGTGATAGTTTTGCCAGTTAGGGTCTTCACGAAGATTTGCAT 114269
>seq21746
Length=7614
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| |||||| || || || | | |||||||||||||||||||||||||| |
Sbjct 2422 CCACCACGCAGACGCAACACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCGGAC 2363
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| || || | ||| || |||| | || | ||| ||||| || || |||
Sbjct 2362 AAAGTACGACCATCTTCCAATTGCTTGCCGGCGAAAATCAAACGTTGTTGATCTGGTGGT 2303
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||||||||| || |||||| || | | ||| | ||||| | | ||| |||
Sbjct 2302 ATACCTTCTTTATCTTGGATTTTAGCCTTGACATTTTCGATAGTGTCAGAAGGCTCGACC 2243
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || || || || || ||||| || |||||||||||
Sbjct 2242 TCCAAAGTGATGGTCTTGCCCGTAAGTGTTTTGACGAAAATCTGCAT 2196
>seq76387
Length=1185
Score = 111 bits (122), Expect = 2e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 138384 GCAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC 138443
|| |||||| |||| ||| | || | || | | | ||||||||||| |||||||||||
Sbjct 185 GCTGCCGCCGCGCAGACGAAGGACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTC 244
Query 138444 GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGG 138503
| || ||| ||||||||| || || || | |||| |||||||| ||||||||
Sbjct 245 CGAGAGGGTGCGCCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGG 304
Query 138504 AGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTC 138563
|| || || || ||||| ||| || || | | || | ||||||| | | |||
Sbjct 305 GGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATGGTGTCGCTGGGCTC 364
Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||||| || | ||| || || || || || || || || ||||||||
Sbjct 365 CACCTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 415
Score = 109 bits (120), Expect = 5e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
||||||| |||||||||||||| | || || |||||||||||| || || | |||
Sbjct 571 CCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCCTCGAGTTGCTTGCCAGCGAAGA 630
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544
| |||||||| |||||||| || || || || ||||| ||| || || | | |
Sbjct 631 TGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCT 690
Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604
| | ||||||| | | ||||||||||| || | ||| || || || || || || || |
Sbjct 691 CAATGGTGTCGCTGGGCTCCACCTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTAACGA 750
Query 138605 AAATCTGCAT 138614
| ||||||||
Sbjct 751 AGATCTGCAT 760
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| | || | || | | | |||||||| || |||||||| ||
Sbjct 762 CCACCGCGCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAG 821
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||||||| || || || | |||| |||||||| |||||||| ||
Sbjct 822 AGGGTGCGACCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 881
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | ||| ||| | | |||||||
Sbjct 882 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTATCGCTGGGCTCCACC 941
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618
|||| || | || || || || || || || ||||| ||||||||| ||
Sbjct 942 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATGCCT 992
>seq8352
Length=27642
Score = 100 bits (110), Expect = 3e-16
Identities = 120/160 (75%), Gaps = 10/160 (6%)
Strand=Plus/Minus
Query 57301 GCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTCG 57360
||||||| |||||||| |||||||||||| || |||| | ||| || ||||| |
Sbjct 21322 GCCTCGATGTTGCCCAGGTCGCCGACGTGTCGGGCGGCGTCTCCGGGCGCCCCGTG---G 21266
Query 57361 CTG---CCGGTGGGGTTAAAGTGCTCGCCC--GCCGACGTGCAGCCGTTGCTGGTGTCGC 57415
||| |||| |||||| ||||| |||| || | |||||||||| ||||||||
Sbjct 21265 CTGTGTCCGGCGGGGTTGTAGTGCGGGCCCATGCTG--GTGCAGCCGTCCGAGGTGTCGC 21208
Query 57416 CGAACTCGTGAACGTGAAATCCGTGCAGGCCCCTCGGCAG 57455
|||||| ||| |||||||| |||||| |||| || |||
Sbjct 21207 CGAACTGGTGGACGTGAAAACCGTGCTTGCCCGGCGTCAG 21168
>seq2574
Length=80092
Score = 95.1 bits (104), Expect = 1e-14
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| || || ||||||||| || || |||| |||
Sbjct 58860 CCTTCTGGATGTTGTAGTCGCTCAGCGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 58919
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544
| || ||||| ||||| || || || || || ||||| ||| || || | | |
Sbjct 58920 TCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCT 58979
Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604
| | ||||||| | | ||||||||||| || | || || || || || || || || |
Sbjct 58980 CGATGGTGTCGCTGGGCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 59039
Query 138605 AAATCTGCAT 138614
| ||||||||
Sbjct 59040 AGATCTGCAT 59049
>seq22380
Length=7273
Score = 93.3 bits (102), Expect = 4e-14
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 57298 TTGGCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGT 57357
|||||||| |||||||||| |||||| ||||| ||| | | | |||| |||||||
Sbjct 6578 TTGGCCTCCACGTTGCCCAGGTCGCCAACGTGACGCTCCTCGTCAGTGGGGCCGCCGTGA 6637
Query 57358 TCGCTGCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCG 57417
|||| ||||| ||||| | || | ||| |||||||||||| || |||||||
Sbjct 6638 GTCTTGCCCTGTGGGTTGAAGTGAGCACCAGACGAGGTGCAGCCGTTGGTGTTGTCGCCA 6697
Query 57418 AACTCGTGAAC 57428
|||||||||||
Sbjct 6698 AACTCGTGAAC 6708
Score = 93.3 bits (102), Expect = 4e-14
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 57298 TTGGCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGT 57357
|||||||| |||||||||| |||||| ||||| ||| | | | |||| |||||||
Sbjct 6807 TTGGCCTCCACGTTGCCCAGGTCGCCAACGTGACGCTCCTCGTCAGTGGGGCCGCCGTGA 6866
Query 57358 TCGCTGCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCG 57417
|||| ||||| ||||| | || | ||| |||||||||||| || |||||||
Sbjct 6867 GTCTTGCCCTGTGGGTTGAAGTGAGCACCAGACGAGGTGCAGCCGTTGGTGTTGTCGCCA 6926
Query 57418 AACTCGTGAAC 57428
|||||||||||
Sbjct 6927 AACTCGTGAAC 6937
>seq322
Length=316913
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465
|||||||||| | || ||||||||||| ||||| ||| | || ||| || ||
Sbjct 56220 ACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAATCGGCTAAGGTTCGCCCATCTTCT 56279
Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525
| ||| || || | | ||||| |||||||| || ||||| || ||||| ||||| ||
Sbjct 56280 AATTGCTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGAGGGATCCCTTCCTTGTC-TTG 56338
Query 138526 ATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584
| |||| | |||| || || | || || | | ||| ||||| | || | || ||
Sbjct 56339 AATTTTCGCCTTAACATGCTCAATTGTATCCGAAGGCTCAACCTCAAGAGTAATAGTCTT 56398
Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618
|| || || || || || ||||| |||||||||
Sbjct 56399 GCCCGTTAGGGTCTTAACGAAAATTTGCATGGCT 56432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495724761722400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |