Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq76387 123 2e-23
seq40302 122 8e-23
seq280 118 1e-21
seq21746 116 4e-21
seq28390 111 1e-19
seq322 109 5e-19
seq53698 105 6e-18
seq2574 100 3e-16
seq4530 86.0 6e-12
>seq76387
Length=1185
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | ||||| || | || ||||| || || || ||||||||
Sbjct 762 CCACCGCGCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAG 821
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| ||||||||| |||| | |||||||| || || ||
Sbjct 822 AGGGTGCGACCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 881
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||||||| ||| ||| ||| | | |||| ||| || | ||| ||
Sbjct 882 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTATCGCTGGGCTCCACC 941
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117
|||| ||| | || |||||||| || || || ||||| ||||||||| ||
Sbjct 942 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATGCCT 992
Score = 96.9 bits (106), Expect = 3e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
||||| || ||||| |||| | |||||| || || || || || |||||| ||||
Sbjct 573 TTTTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCCTCGAGTTGCTTGCCAGCGAAGATG 632
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
| |||||||| || || || |||||||||||||| ||| ||| ||| | | ||
Sbjct 633 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCA 692
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105
| |||||| | ||| || |||| || | ||| |||||||| || || || || ||
Sbjct 693 ATGGTGTCGCTGGGCTCCACCTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTAACGAAG 752
Query 127106 ATCTGCAT 127113
||||||||
Sbjct 753 ATCTGCAT 760
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/232 (69%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 126883 TGCT-CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAAT 126941
|||| || ||||| | || | |||| || | || ||||| ||||| || ||||| |
Sbjct 184 TGCTGCCGCCGCGCAGACGAAGGACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGT 243
Query 126942 CGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGG 127001
| | ||||| || || ||||| || || ||| |||||| |||||||| || |
Sbjct 244 CCGAGAGGGTGCGCCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCG 303
Query 127002 GAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCT 127061
| || |||||||||||||| ||| ||| ||| | | || | |||||| | ||
Sbjct 304 GGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATGGTGTCGCTGGGCT 363
Query 127062 CGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| || |||| || | ||| |||||||| || || || || || ||||||||
Sbjct 364 CCACCTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 415
>seq40302
Length=2817
Score = 122 bits (134), Expect = 8e-23
Identities = 468/724 (65%), Gaps = 12/724 (2%)
Strand=Plus/Minus
Query 46861 TGGCCTTCTTTGCCGCCGCCGACAGCATAGTCAACATCAACATCATCGAGCACATGCAGC 46920
|||||||||| |||||| |||| |||| ||||| ||| || |||| | | |
Sbjct 2664 TGGCCTTCTTCGCCGCCAGCGACGGCATCGTCAATGAGAACCTCGCGGAGCGCTTCATCC 2605
Query 46921 GCACCGTGCCCGAACTGGAGGCGCAGTACTTTTACAATCAACA-AGTGCTCATCGAATGC 46979
|| ||| ||| ||||| | | ||| ||| || | ||| |||||| |
Sbjct 2604 GCGAGGTGACCGTCACCGAGGCCCGTTGCTTCTACGGCTTCCAGATTGC-CATCGAGAAC 2546
Query 46980 ATCCACACGGAAATGTACAACCTTCTCATACACGCCCTCATCAAAGACGAAGAGAAGCAA 47039
||||| |||| |||||| ||| || || || || ||||| ||| | |||
Sbjct 2545 GTCCACTCGGAGATGTACTCCCTGCTGATCAACACCTACATCAGCGACCGCGTCCAGCGC 2486
Query 47040 GCGACGCTTTTGAACGGTTTCGAGAGCATGCCCTGCGT-GCGCAGAAAGGCCGAGTGGGC 47098
| | || || |||| || ||| ||||||||||| ||| |||| ||| |||||||
Sbjct 2485 GAGTACCTCTTCAACGCCATCCAGACGATGCCCTGCGTCGCGAAGAA-GGCGAAGTGGGC 2427
Query 47099 CATGAAGTACATTGAAAACGAAAACGTC---ACTCTGGCCGAACGTTTGATCGCTTTCGC 47155
|||| | | | |||||||| | || | ||||| || | |||| |||||
Sbjct 2426 CATGGCCTGGACGGCCGCCGAAAACGGCGCCACCTTTGCCGAGCGCCTCGTCGCCTTCGC 2367
Query 47156 CATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAA 47215
| ||| |||||| |||||||| ||| |||||| || |||| |||| |
Sbjct 2366 CGCCGTGGAGGGCATCTTCTTCAGCGGCTCCTTTGCCAGCATCTTTTGGCTGAAGAAGCG 2307
Query 47216 AGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCA 47275
|| | ||||| ||||| || || ||||| ||||| ||| | ||||| ||||||||
Sbjct 2306 CGGCCTGATGCCGGGCCTGACCTTCAGCAATGAGCTGATCAGCCGCGACGAGGGCCTGCA 2247
Query 47276 CACCAACTTTGCCTGTCT-CTACTACAACACTAGAGTCGATCAAAAGTTGGACGTGCCCA 47334
| | ||||||||||||| || | | ||| || | | | || || | ||
Sbjct 2246 CTGCGACTTTGCCTGTCTCCTCTTTCGCCACCTGA-TTAAGAAGCCGTACGATGAGCGGG 2188
Query 47335 CCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTC 47394
|| || | || | ||| |||||| ||| ||| |||||| || | || || |
Sbjct 2187 TGGT--GC-AGATCATCAACGAGGCCGTCCGCATCGAGCAGGAGTTCCTCACTGACGCCC 2131
Query 47395 TGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCG 47454
| || | | | | || |||||| ||| ||||| | |||||| || | ||
Sbjct 2130 TTCCGGTCGCCCTCATTGGCATGAACAACGAGCTGATGTCCACGTACATTGAGTACTGCG 2071
Query 47455 CCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCG 47514
||||||| ||||| || |||| |||||| ||| || | ||||||| || |
Sbjct 2070 CCGACCGGCTGCTGGTGGAGCTCGGCGTGCCCAAGTACTACAACGTCAAGAATCCCTTTG 2011
Query 47515 AGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCG 47574
| || ||| | | || || ||||| |||||||| || || ||||||||||||||||
Sbjct 2010 ACTTCATGGAGCAGATCAGCCTGGAGGGAAAGACCAATTTCTTTGAGAAGCGCGTCGGCG 1951
Query 47575 AATA 47578
| ||
Sbjct 1950 AGTA 1947
>seq280
Length=341618
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
||| ||||| | |||| ||||| || | ||||||||| ||||| || ||||| |||
Sbjct 105568 TCCTCCGCGCAGACGCAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGA 105627
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
|| ||||| ||| || || || || || ||| |||| || ||||||||||| |||||
Sbjct 105628 CAAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGAGG 105687
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||||||| ||| || |||| | || | |||||| | ||| ||
Sbjct 105688 AATACCCTCCTTGTCCTGGATCTTAGCTTTGACGTTCTCAATGGTGTCGGATGGCTCAAC 105747
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||||| || || || || || ||||| ||||||||
Sbjct 105748 CTCCAACGTGATGGTTTTACCAGTTAGGGTCTTCACAAATATCTGCAT 105795
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
||| ||||| | |||| ||||| || | ||||||||| ||||| || ||||| |||
Sbjct 113814 TCCTCCGCGCAGACGCAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGA 113873
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
|| ||||| ||| || || || || || ||| |||| || ||||||||||| |||||
Sbjct 113874 CAAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGAGG 113933
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||||||| ||| || |||| | || | |||||| | ||| ||
Sbjct 113934 AATACCCTCCTTGTCCTGGATCTTAGCTTTGACGTTCTCAATGGTGTCGGATGGCTCAAC 113993
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||||| || || || || || ||||| ||||||||
Sbjct 113994 CTCCAACGTGATGGTTTTACCAGTTAGGGTCTTCACAAATATCTGCAT 114041
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| |||||||| | |||||||| ||||| || ||||| || |
Sbjct 105797 CCACCACGAAGACGCAGGACCAAATGCAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 105856
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || |||||||| || ||| ||||||| ||||||||||| || ||
Sbjct 105857 AAGGTGCGGCCATCTTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 105916
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || ||||| || ||| || || | | ||||| |||||| | ||| ||
Sbjct 105917 ATACCTTCCTTATCTTGGATCTTGGCTTTAACATTTTCGATGGTGTCTGATGGCTCAACC 105976
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | |||||||| || || || || || || || |||||
Sbjct 105977 TCCAAGGTGATAGTTTTGCCAGTTAGGGTCTTCACGAAGATTTGCAT 106023
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| |||||||| | |||||||| ||||| || ||||| || |
Sbjct 114043 CCACCACGAAGACGCAGGACCAAATGCAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 114102
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || |||||||| || ||| ||||||| ||||||||||| || ||
Sbjct 114103 AAGGTGCGGCCATCTTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 114162
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || ||||| || ||| || || | | ||||| |||||| | ||| ||
Sbjct 114163 ATACCTTCCTTATCTTGGATCTTGGCTTTAACATTTTCGATGGTGTCTGATGGCTCAACC 114222
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | |||||||| || || || || || || || |||||
Sbjct 114223 TCCAAGGTGATAGTTTTGCCAGTTAGGGTCTTCACGAAGATTTGCAT 114269
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 126883 TGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATC 126942
||| || ||||| | || | ||||||||| | || || || || ||||||||||| ||
Sbjct 104653 TGCGCCTCCGCGAAGACGAAGCACCAAATGGAGAGTCGATTCCTTCTGAATATTGTAGTC 104712
Query 126943 GCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGG 127002
| || || || || || | |||||| || || | ||||| ||||| ||||| ||
Sbjct 104713 GGACAAAGTACGGCCGTCTTCCAACTGTTTACCGGCAAAAATCAAACGCTGTTGATCTGG 104772
Query 127003 AGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTC 127062
||| || || ||||| ||| |||||| || | | ||||| |||||| | |||
Sbjct 104773 AGGAATACCTTCCTTATCCTGGATTTTGGCTTTAACATTTTCGATGGTGTCTGACGGCTC 104832
Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || | ||| | ||||| |||||||| || || || || ||||||||
Sbjct 104833 AACCTCCAAGGTGATGGTTTTACCGGTCAGTGTCTTCACGAAGATCTGCAT 104883
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| || ||||| | |||||||||||||| || || |||||| |
Sbjct 106025 CCACCACGGAGACGCAGGACTAAATGCAGGGTAGACTCTTTTTGTATGTTATAATCGGAC 106084
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || || ||| |||| || ||||| ||||| || ||
Sbjct 106085 AAGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGG 106144
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || ||||| || |||||| || | | ||||| || || | | || ||
Sbjct 106145 ATACCTTCCTTATCTTGGATTTTGGCTTTCACATTTTCGATAGTATCGGAAGGTTCAACC 106204
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | |||||||| |||| ||||| ||||| || |||||
Sbjct 106205 TCCAGAGTGATGGTTTTGCCAGTCAATGTTTTAACAAATATTTGCAT 106251
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|| || |||| ||||| || ||||| | ||||| || || ||||||||||| || |
Sbjct 106253 CCTCCACGTAGGCGCAAAACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGAC 106312
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || | ||| || |||||| | || || || || ||||| || ||
Sbjct 106313 AATGTGCGTCCATCCTCCAACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGG 106372
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || ||||| ||| ||| ||| || |||| | || | ||| || | | ||| ||
Sbjct 106373 ATTCCTTCCTTATCC-TGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAAC 106431
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | || | ||||| || |||| |||||| || ||||||||||||
Sbjct 106432 CTCCAAAGTGATGGTTTTACCCGTCAAAGTTTTGACGAAAATCTGCATG 106480
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| || ||||| | |||||||||||||| || || |||||| |
Sbjct 114271 CCACCACGGAGACGCAGGACTAAATGCAGGGTAGACTCTTTTTGTATGTTATAATCGGAC 114330
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || || ||| |||| || ||||| ||||| || ||
Sbjct 114331 AAGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGG 114390
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || ||||| || |||||| || | | ||||| || || | | || ||
Sbjct 114391 ATACCTTCCTTATCTTGGATTTTGGCTTTCACATTTTCGATAGTATCGGAAGGTTCAACC 114450
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | |||||||| |||| ||||| ||||| || |||||
Sbjct 114451 TCCAGAGTGATGGTTTTGCCAGTCAATGTTTTAACAAATATTTGCAT 114497
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|| || |||| ||||| || ||||| | ||||| || || ||||||||||| || |
Sbjct 114499 CCTCCACGTAGGCGCAAAACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGAC 114558
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || | ||| || |||||| | || || || || ||||| || ||
Sbjct 114559 AATGTGCGTCCATCCTCCAACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGG 114618
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || ||||| ||| ||| ||| || |||| | || | ||| || | | ||| ||
Sbjct 114619 ATTCCTTCCTTATCC-TGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAAC 114677
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | || | ||||| || |||| |||||| || ||||||||||||
Sbjct 114678 CTCCAAAGTGATGGTTTTACCCGTCAAAGTTTTGACGAAAATCTGCATG 114726
>seq21746
Length=7614
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | ||||||||||| || | || ||||| |||||||| ||||| ||| |
Sbjct 2422 CCACCACGCAGACGCAACACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCGGAC 2363
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || ||| ||| || | || || || ||| | ||||| || || ||||| || |||
Sbjct 2362 AAAGTACGACCATCTTCCAATTGCTTGCCGGCGAAAATCAAACGTTGTTGATCTGGTGGT 2303
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || || || || |||||| ||||| | ||||| ||||| | | ||||||
Sbjct 2302 ATACCTTCTTTATCTTGGATTTTAGCCTTGACATTTTCGATAGTGTCAGAAGGCTCGACC 2243
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || ||||| || || ||||| || |||||||||||
Sbjct 2242 TCCAAAGTGATGGTCTTGCCCGTAAGTGTTTTGACGAAAATCTGCAT 2196
>seq28390
Length=4902
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | ||| | ||||| || | || ||||| || || |||||||| ||
Sbjct 537 GCACCACCACGGAGTCGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATATTGTAGTCC 478
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| ||||| || || |||||||| || ||| |||| | |||||||| ||||||
Sbjct 477 GAAAGGGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATGAGACGCTGCTGGTCGGGA 418
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| ||||||||||||||| ||| || ||| | | |||| || || | ||||
Sbjct 417 GGGATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTATCAGAGGGCTCG 358
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| |||| ||| | || ||||| || || || || ||||| || ||||||
Sbjct 357 ACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATTTGCATG 307
>seq322
Length=316913
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|| ||||||| ||||| || |||||||||||||||||| | | || || ||| |||
Sbjct 56220 ACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAATCGGCTAAGGTTCGCCCATCTTCT 56279
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
| || ||||| ||| | || | ||||| ||||| ||||| || || ||||||||
Sbjct 56280 AATTGCTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGAGGGATCCCTTCCTTGTCTTGA 56339
Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084
|||||| ||| | || || | || |||| | ||| || || | || | || |||
Sbjct 56340 ATTTTCGCCTTAACATGCTCAATTGTATCCGAAGGCTCAACCTCAAGAGTAATAGTCTTG 56399
Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117
|| || || || || || ||||| |||||||||
Sbjct 56400 CCCGTTAGGGTCTTAACGAAAATTTGCATGGCT 56432
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|| ||||||| ||||| || ||||||||||||||| || | | || || ||| ||
Sbjct 38741 ACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAACCGGCTAAGGTTCGCCCATCTTCC 38682
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
|||||||| ||| | || | ||||| ||||| || || || || |||||| | ||
Sbjct 38681 TATTGTTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGGGGGATCCCTCCCTTGT-CTTG 38623
Query 127025 ATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
| ||| || ||| | || || | || |||| | ||| || || | || | || ||
Sbjct 38622 AATTTTTGCCTTCACATGCTCAATTGTATCCGAAGGCTCAACCTCAAGAGTAATAGTCTT 38563
Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117
|| || || || || || ||||| |||||||||
Sbjct 38562 GCGCGTTAGGGTCTTAACGAAAATTTGCATGGCT 38529
>seq53698
Length=1888
Score = 105 bits (116), Expect = 6e-18
Identities = 115/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 146071 ACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAAC 146130
|||||||||||||||| ||| || || | | || | ||| | ||| ||||||| |
Sbjct 1720 ACCTGAAACTCGCCGGAGAGCACCCGTCGCGAGTAGATGTTATTCGTGTACGGCTCAATG 1779
Query 146131 GACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAA 146190
||||| ||||| ||||| ||||||||||||| ||||| ||||| ||||| ||||| |
Sbjct 1780 GACTCATTGTTGCCGAGAATCTGCGCCGTCGAGGCGGTGGGCATCGGCGCCAGCAGCAGA 1839
Query 146191 GAGTTTCTCACGCCGTGTCTTTGAATCTTTTCC 146223
||| | ||||||||| | |||||| |||
Sbjct 1840 CTGTTGCGCACGCCGTGCCGGGCAATCTTCTCC 1872
>seq2574
Length=80092
Score = 100 bits (110), Expect = 3e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| |||| || ||| || || || ||||| || || ||| |||||
Sbjct 58862 TTCTGGATGTTGTAGTCGCTCAGCGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 58921
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
| ||||||||| || || || ||||||||||||||| ||| || ||| | | |||
Sbjct 58922 AGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCG 58981
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105
| |||||| | ||| || |||| ||| | || ||||| || || || || || ||
Sbjct 58982 ATGGTGTCGCTGGGCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 59041
Query 127106 ATCTGCAT 127113
||||||||
Sbjct 59042 ATCTGCAT 59049
>seq4530
Length=49833
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|| ||||||| ||||| || ||||||||||||||| || | | || || ||| ||
Sbjct 18515 ACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAACCGGCTAAGGTTCGCCCATCTTCC 18456
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
|||||||| ||| | || | ||||| ||||| || || || || |||||| | ||
Sbjct 18455 TATTGTTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGGGGGATCCCTCCCTTGT-CTTG 18397
Query 127025 ATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
| ||| || ||| | || || | || |||| | ||| || || | || | || ||
Sbjct 18396 AATTTTTGCCTTCACATGCTCAATTGTATCCGAAGGCTCAACCTCAAGAGTAATAGTCTT 18337
Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117
|| || || || || || ||||| |||||||||
Sbjct 18336 GCGCGTTAGGGTCTTAACGAAAATTTGCATGGCT 18303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 474985654320800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |