Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq77432 93.3 1e-14 >seq77432 Length=1164 Score = 93.3 bits (102), Expect = 1e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 8895 TCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCC 8954 |||| | ||||| | || ||||| ||||| | | || ||||| || |||||||| Sbjct 482 TCCGCTAGTCGCGTTATCCCAGCTCAATCGCCAGGTTGAATCGCGCCCCAATAAGCGGCC 541 Query 8955 CGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTT 9014 || |||||||| || || || ||| | || ||||| |||||| |||| ||||| Sbjct 542 AAACAACGGAGATCTGCGTGATTCTGGCGCGCTGGAACAGGACGCCGACCTGATTCTCTT 601 Query 9015 TATCTACCGCGATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACGGCCGAAATCAT 9074 ||||| || |||||||| |||||| || | | || || | ||||||||||| Sbjct 602 CATCTATCGTGATGAGGTTTATAACGAGAACTCCACTGAAAAAGGCATCGCCGAAATCAT 661 Query 9075 CATTGCGAAGCAGCGAAACGGGCCGATTGGCACCGT 9110 ||| | ||||| || | || || || ||||| || Sbjct 662 CATCGGCAAGCAACGTCAGGGCCCCATCGGCACAGT 697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127414329271320