Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq40302 349 3e-91
seq22 232 7e-56
seq76387 156 4e-33
seq28390 143 3e-29
seq280 138 1e-27
seq2574 131 2e-25
seq21746 114 1e-20
seq8352 89.7 5e-13
>seq40302
Length=2817
Score = 349 bits (386), Expect = 3e-91
Identities = 644/934 (69%), Gaps = 19/934 (2%)
Strand=Plus/Plus
Query 132550 TAAAAGTCCGCATCCAAAGTAAAGGTGTCGTCCTTGGCAA---ACATCACGCCAAATTTT 132606
||||| |||||||||| ||| | | ||| |||| |||| ||||| ||
Sbjct 1884 TAAAAATCCGCATCCAGCACAAACTTCTGCTCCGTGGCCTCGGACATGACGCCGCTCTTC 1943
Query 132607 TGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTC 132666
|| || ||||| || |||||||| ||||| || |||||||||| | || || |
Sbjct 1944 TGGTACTCGCCGACGCGCTTCTCAAAGAAATTGGTCTTTCCCTCCAGGCTGATCTGCTCC 2003
Query 132667 ATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGC 132726
|| || || ||||| || |||||||| ||||| || || || || ||||||
Sbjct 2004 ATGAAGTCAAAGGGATTCTTGACGTTGTAGTACTTGGGCACGCCGAGCTCCACCAGCAGC 2063
Query 132727 CTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGC 132786
| |||||| | |||| ||||| ||||| ||| || | || | ||
Sbjct 2064 CGGTCGGCGCAGTACTCAATGTACGTGGACATCAGCTCGTTGTTCATGCCAATGAGGGCG 2123
Query 132787 ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCC 132846
||||| || || || ||||| || ||||||||| ||| || ||| ||| ||| | |
Sbjct 2124 ACCGGAAGGGCGTCAGTGAGGAACTCCTGCTCGATGCGGACGGCCTCGTTGATGATCTGC 2183
Query 132847 CTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCG 132906
|| ||| | || |||| | | || || || | | || |||||||||
Sbjct 2184 ACCACCCGCTCATCGTACGGCTTCTTAATCAGGTGGCGAAAGAGGAGACAGGCAAAGTCG 2243
Query 132907 CAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGG 132966
|| |||| ||||||||| | | || || || |||||||| |||| ||| ||||| |||
Sbjct 2244 CAGTGCAGGCCCTCGTCGCGGCTGATCAGCTCATTGCTGAAGGTCAGGCCCGGCATCAGG 2303
Query 132967 CCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACG 133026
||||| || || |||||||| ||| ||| || ||| ||||||| |||||| |||
Sbjct 2304 CCGCGCTTCTTCAGCCAAAAGATGCTGGCAAAGGAGCCGCTGAAGAAGATGCCCTCCACG 2363
Query 133027 GCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGA---TCCAGCGC 133083
|| ||||| || || ||||||||| | || ||||| | || |||| ||||| |
Sbjct 2364 GCGGCGAAGGCGACGAGGCGCTCGGCAAAGGTGGCGCCGTTTTCGGCGGCCGTCCAGGCC 2423
Query 133084 AGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGG 133143
| ||||| | ||||| | |||||| |||||||| | ||||||||| || | |
Sbjct 2424 ATGGCCCACTTCGCCTTCTTCGCGACGCAGGGCATCGTCTGGATGGCGTTGAAGAG--GT 2481
Query 133144 AGTTTCTCTTC-CGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAG 133200
| | | || || || ||| | |||||||| ||| || || ||||| ||||||
Sbjct 2482 ACTCGCGCTGGACGCGGT-CGCTGATGTAGGTGTTGATCAGCAGGGAGTACATCTCCGAG 2540
Query 133201 TGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACT 133260
|| |||||||| ||||| || || |||||||| ||||| || |||||| || |||
Sbjct 2541 TGGACGTTCTCGATGGCAATCTGGAAGCCGTAGAAGCAACGGGCCTCGGTGACGGTCACC 2600
Query 133261 TCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAG 133320
|| | ||| ||||| | || || || |||||||||||||||||||||||||| |||
Sbjct 2601 TCGCGGATGAAGCGCTCCGCGAGGTTCTCATTGACGATGCCGTCGCTGGCGGCGAAGAAG 2660
Query 133321 GCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC----TCCCAGTCGCG 133376
||||| ||||| ||| || ||||||||||| ||| | ||| | | ||||| | |
Sbjct 2661 GCCAGAACGTGGGAGATAAAGTGGCGCTCGTT-TCGATTTAGCTCGCCGTTCCAGT-GGG 2718
Query 133377 CG-TGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGT 133435
|| ||| |||||||||||||||||||||||| || ||||||||| || ||||
Sbjct 2719 CGAGGTCGCGACTCAGGTCCACCTCCTCGACGGTCCAGAAGCTCGCCTCGGCCTTCTTGT 2778
Query 133436 ACATACTCCACATGTCCGAATATTGTATGGGAAA 133469
|||| |||| ||||| | || | ||||| ||
Sbjct 2779 ACATCGTCCAGATGTCGGCGTACTCGATGGGGAA 2812
>seq22
Length=933496
Score = 232 bits (256), Expect = 7e-56
Identities = 383/547 (70%), Gaps = 8/547 (1%)
Strand=Plus/Minus
Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944
|||||||| ||||||||| |||||||| || || |||||||| ||||| || || ||
Sbjct 329643 GAACATCAGGCAAGCAAAATCGCAATGTAATCCTTCGTCCCTTGAAATTAGCTCATTAGA 329584
Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004
||| ||||| || ||||| ||||| ||||| || |||||||| || | || ||||||||
Sbjct 329583 GAATGTCAAACCAGGCATTAGGCCCCGTTTCTTCAGCCAAAAGATTGAAGCAAAACTGCC 329524
Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC 133064
|||||| | ||| || || || || || || | | || ||||| || ||||
Sbjct 329523 ACTAAAGAAAATGCCTTCAACCGCGGCAAATGCTATTATACGTTCGCCAAAGTTGGCCGA 329464
Query 133065 TTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGAC-GCACGGCATCGTTT 133123
||| | ||||| ||| ||||| || ||||| || || ||| |||||||| |
Sbjct 329463 TTTCGATGAAATCCACGCCAGTGCCCAATCAGCCTTGCGCTTAACAGCA-GGCATCGTCT 329405
Query 133124 CGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGATGA 133180
| || || || ||||| | | | || || | | | | | || || || || |
Sbjct 329404 CAATAGCATTGAACAA--GTAATCCCT-TTGCTTGCCATCCTTAATATATGTATCAATTA 329348
Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240
| |||||||| || || || |||||||||||||||||||| || || ||||| |
Sbjct 329347 ATATGCTGTACATTTCAGAATGCACATTCTCCATGGCGATTTGAAATCCATAGAAGCAAC 329288
Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300
||||||| | || |||||||| ||| || || || | ||||| || || || |
Sbjct 329287 GCGCCTCTGTGATTTGAACTTCTTGGCTGAAGCGTTCAACTAAGTTTTCATTCACAATAC 329228
Query 133301 CGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA 133360
| ||| |||||| || || |||| |||||| ||||||||||| || |||||| | |
Sbjct 329227 CATCGGAGGCGGCAAAGAATGCCAAAACGTGCGAAATGAAATGGCGTTCATTGTCGGTGA 329168
Query 133361 AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACG 133420
||| |||| || | | || ||||| ||||| ||||| || || ||||| || || |
Sbjct 329167 GACGCGCCCAATCATCCATATCTTTGGAAAGGTCAACCTCTTCCACCGTCCAGAAGGATG 329108
Query 133421 CCTCGGC 133427
| || ||
Sbjct 329107 CTTCTGC 329101
>seq76387
Length=1185
Score = 156 bits (172), Expect = 4e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| || ||||| |||| || ||| ||| |
Sbjct 415 ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTGGAGCCCAGC 356
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| |||||| | |||||
Sbjct 355 GACACCATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAG 296
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||||||||| ||||| || |||| |||||||||| |||||||||
Sbjct 295 CAGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGGCGCACCCTCTCGGACTACAAC 236
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCGC 38474
||||||||||| | || || || |||| || ||| || | |||||| ||
Sbjct 235 ATCCAAAAGGAGTCCACCCTCCACCTGGTCCTTCGTCTGCGCGGCGGCAGC 185
Score = 140 bits (154), Expect = 3e-28
Identities = 145/190 (76%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| || ||||| |||| || ||| ||| |
Sbjct 760 ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTGGAGCCCAGC 701
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| |||||| | |||||
Sbjct 700 GACACCATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAG 641
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | ||| ||||| || || || |||| |||||||||| ||||||||||
Sbjct 640 CAGCGTCTCATCTTCGCTGGCAAGCAACTCGAGGACGGTCGCACCCTCAGCGACTACAAC 581
Query 38424 ATCCAAAAGG 38433
||||||||||
Sbjct 580 ATCCAAAAGG 571
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || ||||| ||||| ||||||||| |||| || ||| ||| |
Sbjct 988 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGCCCAGC 929
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | || | || |||| ||||| ||||| || ||| | |||||
Sbjct 928 GATACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 869
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | ||| || || ||||| || |||| ||||||||| || ||||||
Sbjct 868 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGACGGTCGCACCCTCTCGGATTACAAC 809
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| | || || || ||||||| ||| || | || ||
Sbjct 808 ATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCCGTCTGCGCGGTGG 762
Score = 84.2 bits (92), Expect = 2e-11
Identities = 75/94 (80%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 38340 AAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGAC 38399
|| ||||| || || | ||||| ||||| ||||| | ||| ||||| ||||| || |||
Sbjct 1185 AAGGAGGGCATCCCTCCGGACCAGCAGCGACTCATCTTCGCTGGCAAGCAGCTCGAGGAC 1126
Query 38400 GAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433
| ||||| || | ||||||||||||||||||||
Sbjct 1125 GGTCGCACTCTGAGCGACTACAACATCCAAAAGG 1092
>seq28390
Length=4902
Score = 143 bits (158), Expect = 3e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| |||||||| || || || || ||||||||||| ||||||||| |||| |||||| |
Sbjct 304 AAACATGCAAATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGCC 363
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| | || | | | | | || | ||| |||| ||||| ||||| || || ||||
Sbjct 364 CTCTGATACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATCCCTCCCGA 423
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| ||||| | ||| || |||||||| || |||| |||||||| |||||
Sbjct 424 CCAGCAGCGTCTCATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACCCTTTCGGACTA 483
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||| ||||| ||||| |||| || || ||||| || ||
Sbjct 484 CAATATCCAGAAGGAGTCGACCCTCCACTTGGTCCTCCG 522
>seq280
Length=341618
Score = 138 bits (152), Expect = 1e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || |||||||| |||||| | || || ||| | |
Sbjct 106023 ATGCAAATCTTCGTGAAGACCCTAACTGGCAAAACTATCACCTTGGAGGTTGAGCCATCA 105964
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | ||| |||||| || |||| || || || || |||||| | || ||
Sbjct 105963 GACACCATCGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAG 105904
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||||||||| || || | |||||| | |||||||||
Sbjct 105903 CAGCGTTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACCTTGTCTGACTACAAC 105844
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||| | || ||||||||||| ||||||
Sbjct 105843 ATCCAAAAGGAGTCTACTCTGCATTTGGTCCTGCGT 105808
Score = 138 bits (152), Expect = 1e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || |||||||| |||||| | || || ||| | |
Sbjct 114269 ATGCAAATCTTCGTGAAGACCCTAACTGGCAAAACTATCACCTTGGAGGTTGAGCCATCA 114210
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | ||| |||||| || |||| || || || || |||||| | || ||
Sbjct 114209 GACACCATCGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAG 114150
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||||||||| || || | |||||| | |||||||||
Sbjct 114149 CAGCGTTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACCTTGTCTGACTACAAC 114090
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||| | || ||||||||||| ||||||
Sbjct 114089 ATCCAAAAGGAGTCTACTCTGCATTTGGTCCTGCGT 114054
Score = 125 bits (138), Expect = 7e-24
Identities = 160/218 (73%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| ||||| || || || || |||||||| || ||| | || || ||| | |
Sbjct 105568 AATGCAAATCTTCGTGAAGACCCTGACTGGCAAAACTATAACCTTGGAGGTTGAGCCATC 105509
Query 38303 CGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
||||| | | | ||||| | || | || || | ||||| || || ||||| | ||||
Sbjct 105508 CGACACCATTGAAAACG-TCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACC 105450
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || || | |||| || || || ||||| || |||| ||||||| | |||||||
Sbjct 105449 AGCAACGTTTGATTTTTGCTGGTAAGCAGCTCGAAGACGGGCGCACCTTGTCGGACTACA 105390
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||||| | || || |||||||| ||||||
Sbjct 105389 ACATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCGT 105352
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| ||||| || || || || || || ||||||||||| | || || ||| | ||
Sbjct 105795 ATGCAGATATTTGTGAAGACCCTAACTGGTAAAACCATCACGTTGGAGGTTGAGCCATCC 105736
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| || |||| ||||| ||||| ||||| | || ||
Sbjct 105735 GACACCATTGAGAACG-TCAAAGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCA 105677
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||| ||||| || || || || | |||||| | |||||||||
Sbjct 105676 GCAGCGTTTAATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACCTTGTCCGACTACAA 105617
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||||| | ||||| || ||||| |||||| || | || ||
Sbjct 105616 CATCCAAAAGGAGTCTACGCTCCACTTGGTTCTGCGTCTGCGCGGAGG 105569
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| ||||| || || || || || || ||||||||||| | || || ||| | ||
Sbjct 114041 ATGCAGATATTTGTGAAGACCCTAACTGGTAAAACCATCACGTTGGAGGTTGAGCCATCC 113982
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| || |||| ||||| ||||| ||||| | || ||
Sbjct 113981 GACACCATTGAGAACG-TCAAAGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCA 113923
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||| ||||| || || || || | |||||| | |||||||||
Sbjct 113922 GCAGCGTTTAATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACCTTGTCCGACTACAA 113863
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||||| | ||||| || ||||| |||||| || | || ||
Sbjct 113862 CATCCAAAAGGAGTCTACGCTCCACTTGGTTCTGCGTCTGCGCGGAGG 113815
Score = 123 bits (136), Expect = 2e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || || |||||||||||| | || || ||| | |
Sbjct 104883 ATGCAGATCTTCGTGAAGACACTGACCGGTAAAACCATCACCTTGGAGGTTGAGCCGTCA 104824
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | ||| |||||| ||||||| || || || || ||||| | || |||
Sbjct 104823 GACACCATCGAAAATGTTAAAGCCAAAATCCAGGATAAGGAAGGTATTCCTCCAGATCAA 104764
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | |||| || || |||||| |||| |||| || || | |||||||||
Sbjct 104763 CAGCGTTTGATTTTTGCCGGTAAACAGTTGGAAGACGGCCGTACTTTGTCCGACTACAAT 104704
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| || |||||| |||| || ||||||||||| |||
Sbjct 104703 ATTCAGAAGGAATCGACTCTCCATTTGGTGCTTCGT 104668
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || || |||||||||||| | || || ||| | |
Sbjct 105339 ATGCAAATCTTCGTGAAGACCCTAACTGGTAAAACCATCACCTTGGAGGTTGAGCCGTCA 105280
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | ||||| | || | || || | || ||||| || ||||| | || ||
Sbjct 105279 GACACCATCGAAAACG-TCAAGGCCAAGATTCAAGATAAAGAAGGCATTCCTCCAGATCA 105221
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | |||| ||| || ||||| |||| |||| |||||| | ||||||||
Sbjct 105220 ACAACGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGCCGCACCTTGTCGGACTACAA 105161
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||||||| | || || |||||||| ||||||
Sbjct 105160 CATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCGT 105124
Score = 118 bits (130), Expect = 1e-21
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||||||||||||| | || || ||| | |
Sbjct 105111 ATGCAAATTTTCGTCAAGACTCTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCGTCA 105052
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| |||| | || |||| |||||||| || || || | || ||
Sbjct 105051 GACACCATCGAGAACG-TTAAGGCCAAGATCCAGGACAAAGAAGGTATCCCACCAGATCA 104993
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| | || | ||| ||||| ||||| || || | || || | ||| || ||
Sbjct 104992 ACAGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGTACTTTGTCCGATTATAA 104933
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||||||| | || || |||||||| ||||||
Sbjct 104932 CATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCGT 104896
Score = 102 bits (112), Expect = 8e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||||||||| || ||||| | || |||||||||||||| | || || || | ||
Sbjct 106251 ATGCAAATATTTGTTAAAACATTGACTGGCAAAACCATCACTCTGGAGGTTGAACCTTCC 106192
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | ||| | |||| ||||||| || || || || || || | || |||
Sbjct 106191 GATACTATCGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAA 106132
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||| ||||| || || | |||||| | ||| || |||
Sbjct 106131 CAGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCTTGTCCGATTATAAC 106072
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| ||||| || | || |||||||| || ||||||
Sbjct 106071 ATACAAAAAGAGTCTACCCTGCATTTAGTCCTGCGT 106036
Score = 102 bits (112), Expect = 8e-17
Identities = 160/228 (70%), Gaps = 1/228 (0%)
Strand=Plus/Minus
Query 38232 CTCTTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGAC 38291
|||||| ||||| ||||||| ||||| || || | || ||||| |||||||| | ||
Sbjct 106718 CTCTTTCAAAAA-TGCAAATCTTCGTGAAGACTTTGACTGGCAAGACCATCACTCTGGAG 106660
Query 38292 GTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATT 38351
|| || | |||| | | | | | |||| || || | ||||||||||| |||
Sbjct 106659 GTTGAACCATCCGATACTATTGAGAATGTAAAAGCCAAGATTCAAGACAAAGAGGGTATT 106600
Query 38352 CCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTC 38411
|| | || || || || | || | || |||||||| |||| |||| |||||| |
Sbjct 106599 CCACCAGATCAGCAACGTTTAATCTTTGCCGGCAAACAATTGGAAGACGGACGCACCTTG 106540
Query 38412 AACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||| ||||||||||||||||| | || || ||| |||| || |||
Sbjct 106539 TCCGATTACAACATCCAAAAGGAGTCTACACTTCATCTGGTTCTTCGT 106492
Score = 102 bits (112), Expect = 8e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||||||||| || ||||| | || |||||||||||||| | || || || | ||
Sbjct 114497 ATGCAAATATTTGTTAAAACATTGACTGGCAAAACCATCACTCTGGAGGTTGAACCTTCC 114438
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | ||| | |||| ||||||| || || || || || || | || |||
Sbjct 114437 GATACTATCGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAA 114378
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||| ||||| || || | |||||| | ||| || |||
Sbjct 114377 CAGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCTTGTCCGATTATAAC 114318
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| ||||| || | || |||||||| || ||||||
Sbjct 114317 ATACAAAAAGAGTCTACCCTGCATTTAGTCCTGCGT 114282
Score = 102 bits (112), Expect = 8e-17
Identities = 160/228 (70%), Gaps = 1/228 (0%)
Strand=Plus/Minus
Query 38232 CTCTTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGAC 38291
|||||| ||||| ||||||| ||||| || || | || ||||| |||||||| | ||
Sbjct 114964 CTCTTTCAAAAA-TGCAAATCTTCGTGAAGACTTTGACTGGCAAGACCATCACTCTGGAG 114906
Query 38292 GTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATT 38351
|| || | |||| | | | | | |||| || || | ||||||||||| |||
Sbjct 114905 GTTGAACCATCCGATACTATTGAGAATGTAAAAGCCAAGATTCAAGACAAAGAGGGTATT 114846
Query 38352 CCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTC 38411
|| | || || || || | || | || |||||||| |||| |||| |||||| |
Sbjct 114845 CCACCAGATCAGCAACGTTTAATCTTTGCCGGCAAACAATTGGAAGACGGACGCACCTTG 114786
Query 38412 AACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||| ||||||||||||||||| | || || ||| |||| || |||
Sbjct 114785 TCCGATTACAACATCCAAAAGGAGTCTACACTTCATCTGGTTCTTCGT 114738
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| | ||||| ||||||||||| | || || ||| | ||
Sbjct 106479 ATGCAGATTTTCGTCAAAACTTTGACGGGTAAAACCATCACTTTGGAGGTTGAGCCTTCC 106420
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | |||| ||||| | || || || ||||| || | || |||
Sbjct 106419 GATACCATTGAGAATGTCAAAGCTAAAATTCAGGATAAGGAAGGAATCCCACCAGATCAA 106360
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | |||| ||| ||||| ||| |||| || | ||||| | ||||||||
Sbjct 106359 CAACGTTTAATTTTCGCTGGCAAGCAGTTGGAGGATGGACGCACATTGTCTGACTACAAT 106300
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|| || |||||| | || ||||||| || ||||
Sbjct 106299 ATTCAGAAGGAATCTACATTGCATTTAGTTTTGCG 106265
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| | ||||| ||||||||||| | || || ||| | ||
Sbjct 114725 ATGCAGATTTTCGTCAAAACTTTGACGGGTAAAACCATCACTTTGGAGGTTGAGCCTTCC 114666
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | |||| ||||| | || || || ||||| || | || |||
Sbjct 114665 GATACCATTGAGAATGTCAAAGCTAAAATTCAGGATAAGGAAGGAATCCCACCAGATCAA 114606
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | |||| ||| ||||| ||| |||| || | ||||| | ||||||||
Sbjct 114605 CAACGTTTAATTTTCGCTGGCAAGCAGTTGGAGGATGGACGCACATTGTCTGACTACAAT 114546
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|| || |||||| | || ||||||| || ||||
Sbjct 114545 ATTCAGAAGGAATCTACATTGCATTTAGTTTTGCG 114511
>seq2574
Length=80092
Score = 131 bits (144), Expect = 2e-25
Identities = 147/194 (76%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || ||||||||||| ||||||||| |||| || ||| ||
Sbjct 59052 AAGATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGCCC 58993
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GA 38359
| ||||| | | | | | || | || |||| ||||| ||||| || |||||| ||
Sbjct 58992 AGCGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGA 58934
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| || || | ||| ||||| ||||| || |||| || || || | ||||||
Sbjct 58933 CCAGCAGCGACTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACGCTGAGCGACTA 58874
Query 38420 CAACATCCAAAAGG 38433
||||||||| ||||
Sbjct 58873 CAACATCCAGAAGG 58860
>seq21746
Length=7614
Score = 114 bits (126), Expect = 1e-20
Identities = 165/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297
|| |||||||| || ||||| ||||| || |||||||| |||||||| | || ||||||
Sbjct 2190 AACAAAATGCAGATTTTCGTCAAAACACTTACGGGCAAGACCATCACTTTGGAGGTCGAG 2249
Query 38298 GCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357
| | |||| | ||| | || | ||||||| || ||||| || || || |
Sbjct 2250 CCTTCTGACACTATCGAAAATGTCAAGGCTAAAATCCAAGATAAAGAAGGTATACCACCA 2309
Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417
|| ||||| || | |||| ||| ||||| || |||| || | || || | ||||
Sbjct 2310 GATCAACAACGTTTGATTTTCGCCGGCAAGCAATTGGAAGATGGTCGTACTTTGTCCGAC 2369
Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||| |||||||| | || || || |||||| ||||| || | || ||
Sbjct 2370 TACAACATTCAAAAGGAGTCAACCCTCCACTTGGTGTTGCGTCTGCGTGGTGG 2422
>seq8352
Length=27642
Score = 89.7 bits (98), Expect = 5e-13
Identities = 130/178 (73%), Gaps = 12/178 (7%)
Strand=Plus/Minus
Query 107659 CCGACTTGAGGTTGCCCAGGTCGCCGACGTGCCTGATCTCGGCGTC---GGGCGCGCCGT 107715
||| || || ||||||||||||||||||||| | | ||||||| |||||| ||||
Sbjct 21324 CCGCCTCGATGTTGCCCAGGTCGCCGACGTGTCGGG---CGGCGTCTCCGGGCGCCCCGT 21268
Query 107716 GGTCGCGCTTCGTCGGG-TTGAAATGCTCGCCG--GCCGACGTGCAGCCGTTGCTCGCGT 107772
|| | | | || |||| ||| | ||| ||| || | |||||||||| | ||
Sbjct 21267 GGCTGTG-TCCGGCGGGGTTGTAGTGCGGGCCCATGCTG--GTGCAGCCGTCCGAGGTGT 21211
Query 107773 CGCCGAACTCGTGCACGTGGAAGCCGTGCAGGCCGCGCGGCAGGCCGAGCACGTAGCC 107830
||||||||| ||| ||||| || |||||| ||| ||| ||||||| |||| | |||
Sbjct 21210 CGCCGAACTGGTGGACGTGAAAACCGTGCTTGCCCGGCGTCAGGCCGCGCACCTCGCC 21153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499630925292800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |