Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_014595.1
Length=170605
Score E
Sequences producing significant alignments: (Bits) Value
seq45162 82.4 8e-11
>seq45162
Length=2398
Score = 82.4 bits (90), Expect = 8e-11
Identities = 150/217 (69%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 53015 CATGGTTGCTTTCCGGCCGCAATGGCAGACGCCCTTTAATTCAACCAGTTTATCCGAAAT 53074
|||| | ||||| ||||| ||||| || | | ||||| ||||||||||||||||
Sbjct 921 CATGCTGGCTTTACGGCCACAATGACAAATGGTTTTTAACTCAACCAGTTTATCCGCCCA 980
Query 53075 AGCCAG-AAGTCTGGCCGAACCGGGAAATAATTGACCCCGAAAATCTGTTCTTAACCCGT 53133
||||| |||| | | | ||| ||| || | || |||||||| || | ||| ||||
Sbjct 981 CGCCAGTAAGTATTGGC-TACCAACAAACAACTCGCCGCGAAAATCGGTACGTAATCCGT 1039
Query 53134 AACACATAACGGGGATATTGTAATTATCAACCACTTGAGCTAACTGGTCAATTTGCTCTG 53193
|||||| || || |||| ||||| ||||| | || ||| | || |||||
Sbjct 1040 AACACAGTACCGGAATATCAAGGTTATCTACCACATCAGACAACGCTTTAACCTGCTCAC 1099
Query 53194 GTAACAAAAATTGAGCTTCATCGACCAGGACACAATG 53230
| | |||||| ||||||||||| ||||| ||
Sbjct 1100 GCGTGAGGAATTGACTTTCATCGACCAACACACAGTG 1136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545216685258000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |