Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_014595.1 Length=170605 Score E Sequences producing significant alignments: (Bits) Value seq45162 82.4 8e-11 >seq45162 Length=2398 Score = 82.4 bits (90), Expect = 8e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 53015 CATGGTTGCTTTCCGGCCGCAATGGCAGACGCCCTTTAATTCAACCAGTTTATCCGAAAT 53074 |||| | ||||| ||||| ||||| || | | ||||| |||||||||||||||| Sbjct 921 CATGCTGGCTTTACGGCCACAATGACAAATGGTTTTTAACTCAACCAGTTTATCCGCCCA 980 Query 53075 AGCCAG-AAGTCTGGCCGAACCGGGAAATAATTGACCCCGAAAATCTGTTCTTAACCCGT 53133 ||||| |||| | | | ||| ||| || | || |||||||| || | ||| |||| Sbjct 981 CGCCAGTAAGTATTGGC-TACCAACAAACAACTCGCCGCGAAAATCGGTACGTAATCCGT 1039 Query 53134 AACACATAACGGGGATATTGTAATTATCAACCACTTGAGCTAACTGGTCAATTTGCTCTG 53193 |||||| || || |||| ||||| ||||| | || ||| | || ||||| Sbjct 1040 AACACAGTACCGGAATATCAAGGTTATCTACCACATCAGACAACGCTTTAACCTGCTCAC 1099 Query 53194 GTAACAAAAATTGAGCTTCATCGACCAGGACACAATG 53230 | | |||||| ||||||||||| ||||| || Sbjct 1100 GCGTGAGGAATTGACTTTCATCGACCAACACACAGTG 1136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545216685258000