Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_014662.1
Length=165540
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 145 8e-30
seq85787 114 1e-20
>seq81708
Length=1085
Score = 145 bits (160), Expect = 8e-30
Identities = 136/173 (79%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 62001 GGTGAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAGAATTAAATCGGAC 62060
||| || ||||| | |||||| ||||||||||| |||| |||||| | ||||| || ||
Sbjct 250 GGTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCAGCGCGTTAAAGCGCAC 309
Query 62061 AGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATC 62120
||||| || ||||| ||||| |||| ||| ||||||||||| ||||| | || |||||
Sbjct 310 GGCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCGGATGGTTCACGGCATC 369
Query 62121 TTCTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATGTTGGCCACCTTCAA 62173
||| || ||||| | ||| || || |||||||| || || ||||||||||
Sbjct 370 TTCCAACGTTTCACGACGCAGTACGTTTACGTTCAGGTGCTGACCACCTTCAA 422
>seq85787
Length=1013
Score = 114 bits (126), Expect = 1e-20
Identities = 132/176 (75%), Gaps = 4/176 (2%)
Strand=Plus/Plus
Query 61998 CTTGGTGAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAGAATTAAATCG 62057
|| |||||||||||||| ||| || || |||||| ||| || || || || || ||
Sbjct 598 CTGGGTGAAAGTACGTGTAATTACATCTTTCTGCTGCTCTTTAGTGAGCGAGTTGAAGCG 657
Query 62058 GACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGC 62117
|||||||| |||||||| || || |||||||| |||||||| || ||||||| | ||
Sbjct 658 TACAGCATAGCCAGAAACGCGGATGGTCAGCTGCGGATATTTCTCCGGATGTTCCATGGC 717
Query 62118 ATCTTCTAAAG--TTTCTTTAGTCAGAACATTCACGTTCAGATGTTGGCCACCTTC 62171
||| | | || | || | ||| || || |||||||||||||| ||||||||
Sbjct 718 ATC--CAACAGCATCTCACGATTCATTACGTTGACGTTCAGATGTTGACCACCTTC 771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 529026244600000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |