Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq81708 152 6e-32 >seq81708 Length=1085 Score = 152 bits (168), Expect = 6e-32 Identities = 146/187 (78%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 51003 GAAGGTGGACAACACTTAAACGTAAACGTGTTGCGCCGCGAAACTCTGGAAGATGCTGTG 51062 |||||||| || ||| | ||||||||||| |||| || ||||| |||||||||| ||| Sbjct 420 GAAGGTGGTCAGCACCTGAACGTAAACGTACTGCGTCGTGAAACGTTGGAAGATGCCGTG 361 Query 51063 AAGCATCCAGAAAAATACCCACAGTTAACGATCCGTGTGTCCGGCTATGCAGTGCGTTTC 51122 || ||||| |||||||| |||||||| || || || || ||||||||||| ||||| || Sbjct 360 AACCATCCGGAAAAATATCCACAGTTGACCATTCGCGTTTCCGGCTATGCCGTGCGCTTT 301 Query 51123 AATTCACTGACTCCTGAACAACAGCGCGACGTTATCGCCCGAACCTTTACAGAGAGTCTA 51182 || | ||||| || || || ||||| || ||||| | || || ||||| || || || Sbjct 300 AACGCGCTGACGCCAGAGCAGCAGCGTGATGTTATTACTCGTACATTTACCGAAAGCCTG 241 Query 51183 TAATGGC 51189 |||| || Sbjct 240 TAATTGC 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569471979179600