Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_019522.1 Length=48454 Score E Sequences producing significant alignments: (Bits) Value seq64248 80.6 8e-11 >seq64248 Length=1491 Score = 80.6 bits (88), Expect = 8e-11 Identities = 89/119 (75%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 21851 GAAAAAATTAACGTCGATTTGGCGGCGTCTGGCGTAGCGTACAAAGAGCGAATGAATTTG 21910 || ||| | || |||||| |||| || | ||||| || | |||||||| ||| || Sbjct 1384 GACAAAGTGAATGTCGATCTGGCCGCCGCGGGCGTGGCTTTTAAAGAGCGCTACAATATG 1325 Query 21911 CCGGTGATTGCCGAGCAGGTGGAGCGCGAACAGCCGGAGCATCTGCGTGAATACTTTCG 21969 || ||||||||||| |||||||||||| || || ||| |||||||||| ||||| Sbjct 1324 CCCGTGATTGCCGAAATGGTGGAGCGCGAGCAACCAGAGGCGCTGCGTGAATGGTTTCG 1266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154771743840640