Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq280 118 2e-21
>seq280
Length=341618
Score = 118 bits (130), Expect = 2e-21
Identities = 151/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||||||||| | |||||||| || || ||||| || ||| | || || |||| | ||
Sbjct 106250 TGCAAATATTTGTTAAAACATTGACTGGCAAAACCATCACTCTGGAGGTTGAACCTTCCG 106191
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
||||||| ||||||| ||| ||||| ||| ||| ||||| || ||||| |||||||
Sbjct 106190 ATACTATCGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAAC 106131
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | | || || || || || || | || ||| | || || | |||||||| |
Sbjct 106130 AGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCTTGTCCGATTATAACA 106071
Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239
|||||||||| || || | ||||||||
Sbjct 106070 TACAAAAAGAGTCTACCCTGCATTTAGT 106043
Score = 118 bits (130), Expect = 2e-21
Identities = 151/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||||||||| | |||||||| || || ||||| || ||| | || || |||| | ||
Sbjct 114496 TGCAAATATTTGTTAAAACATTGACTGGCAAAACCATCACTCTGGAGGTTGAACCTTCCG 114437
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
||||||| ||||||| ||| ||||| ||| ||| ||||| || ||||| |||||||
Sbjct 114436 ATACTATCGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAAC 114377
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | | || || || || || || | || ||| | || || | |||||||| |
Sbjct 114376 AGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCTTGTCCGATTATAACA 114317
Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239
|||||||||| || || | ||||||||
Sbjct 114316 TACAAAAAGAGTCTACCCTGCATTTAGT 114289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 785314686976400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |