Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq81708 149 7e-31 seq85787 102 9e-17 >seq81708 Length=1085 Score = 149 bits (164), Expect = 7e-31 Identities = 136/172 (79%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 61351 GTGAAAGTGCGTGAAATAACGTCGCGCTGTTGCTCTGGAGTTAGAGCATTAAAACGAACG 61410 || || || || | |||||| || ||||| |||||||| || || || ||||| || ||| Sbjct 251 GTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCAGCGCGTTAAAGCGCACG 310 Query 61411 GCATAGCCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCT 61470 |||||||| ||||| ||||| |||| ||| ||||||||||| ||||| | || |||||| Sbjct 311 GCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCGGATGGTTCACGGCATCT 370 Query 61471 TCTAAAGTTTCTTTAGACAGCACGTTCACGTTCAAATGCTGTCCACCTTCAA 61522 || || ||||| | ||| ||||| ||||||| ||||| |||||||||| Sbjct 371 TCCAACGTTTCACGACGCAGTACGTTTACGTTCAGGTGCTGACCACCTTCAA 422 >seq85787 Length=1013 Score = 102 bits (112), Expect = 9e-17 Identities = 127/172 (74%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 61351 GTGAAAGTGCGTGAAATAACGTCGCGCTGTTGCTCTGGAGTTAGAGCATTAAAACGAACG 61410 |||||||| |||| ||| || || ||| |||||| ||| || | || || || || Sbjct 602 GTGAAAGTACGTGTAATTACATCTTTCTGCTGCTCTTTAGTGAGCGAGTTGAAGCGTACA 661 Query 61411 GCATAGCCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCT 61470 |||||||||||||| || || |||||||| |||||||| || ||||||| | ||||| Sbjct 662 GCATAGCCAGAAACGCGGATGGTCAGCTGCGGATATTTCTCCGGATGTTCCATGGCATC- 720 Query 61471 TCTAAAGTTTCTTTAGA--CAGCACGTTCACGTTCAAATGCTGTCCACCTTC 61520 | | || ||| || || ||||| ||||||| ||| || |||||||| Sbjct 721 -CAACAGCATCTCACGATTCATTACGTTGACGTTCAGATGTTGACCACCTTC 771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553754625435200