Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_023561.1
Length=173276
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 149 7e-31
seq85787 102 9e-17
>seq81708
Length=1085
Score = 149 bits (164), Expect = 7e-31
Identities = 136/172 (79%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 61351 GTGAAAGTGCGTGAAATAACGTCGCGCTGTTGCTCTGGAGTTAGAGCATTAAAACGAACG 61410
|| || || || | |||||| || ||||| |||||||| || || || ||||| || |||
Sbjct 251 GTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCAGCGCGTTAAAGCGCACG 310
Query 61411 GCATAGCCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCT 61470
|||||||| ||||| ||||| |||| ||| ||||||||||| ||||| | || ||||||
Sbjct 311 GCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCGGATGGTTCACGGCATCT 370
Query 61471 TCTAAAGTTTCTTTAGACAGCACGTTCACGTTCAAATGCTGTCCACCTTCAA 61522
|| || ||||| | ||| ||||| ||||||| ||||| ||||||||||
Sbjct 371 TCCAACGTTTCACGACGCAGTACGTTTACGTTCAGGTGCTGACCACCTTCAA 422
>seq85787
Length=1013
Score = 102 bits (112), Expect = 9e-17
Identities = 127/172 (74%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 61351 GTGAAAGTGCGTGAAATAACGTCGCGCTGTTGCTCTGGAGTTAGAGCATTAAAACGAACG 61410
|||||||| |||| ||| || || ||| |||||| ||| || | || || || ||
Sbjct 602 GTGAAAGTACGTGTAATTACATCTTTCTGCTGCTCTTTAGTGAGCGAGTTGAAGCGTACA 661
Query 61411 GCATAGCCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCT 61470
|||||||||||||| || || |||||||| |||||||| || ||||||| | |||||
Sbjct 662 GCATAGCCAGAAACGCGGATGGTCAGCTGCGGATATTTCTCCGGATGTTCCATGGCATC- 720
Query 61471 TCTAAAGTTTCTTTAGA--CAGCACGTTCACGTTCAAATGCTGTCCACCTTC 61520
| | || ||| || || ||||| ||||||| ||| || ||||||||
Sbjct 721 -CAACAGCATCTCACGATTCATTACGTTGACGTTCAGATGTTGACCACCTTC 771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 553754625435200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |