Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq59028 131 2e-25 >seq59028 Length=1665 Score = 131 bits (144), Expect = 2e-25 Identities = 182/255 (71%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 93445 CTGGATACCCTTGACTCGAAGATTGACCAGTGGTACGCCAGTGGTTGTACTGGCGATGTC 93504 |||||||| || || | || || |||||||||||||||| | ||||| || ||||| Sbjct 1380 CTGGATACGCTGGATTGTAAAATCGACCAGTGGTACGCCAACGCCTGTACCGGTGATGTG 1439 Query 93505 ATCAAAGGGTATTGGTCGGGGCGTGCCGCGGGCGTATGGGACCACATGACGGCGGTGGAG 93564 || |||| ||||| || | || || | ||||| |||| || ||| | ||| Sbjct 1440 ATTAAAGCCAGCTGGTCAGGTCAAAAGGCCGGTGCGTGGGATCACAGCACCGCGATTGAG 1499 Query 93565 CTGAGTAACTTTAACGTCCAGAACTGTCGGGGCGGAAAGGTACTGAACTTGCCGCGTTGC 93624 || |||||||| | ||| ||||| ||||| | ||| ||||| ||||||| || Sbjct 1500 CTCTCCAACTTTAATGCGCAGCACTGTAAAGGCGGCATGGTGTTGAACCTGCCGCGCTGT 1559 Query 93625 ACGCAATCCTTCATCTGGAACGGCTGGATTGAGCACAGTGACAACCCAGGCGACCTGTCG 93684 | ||||| |||| |||||||||||||||||||| || || ||||| | ||| Sbjct 1560 AGCCAATCGATCATTCACAACGGCTGGATTGAGCACAGCGATTTTCCTGGCGATATCTCG 1619 Query 93685 AACGGCCAGTGGATT 93699 ||||| ||||||||| Sbjct 1620 AACGGGCAGTGGATT 1634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 697800001026800