Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_024124.2
Length=169148
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 197 1e-45
seq85787 116 4e-21
>seq81708
Length=1085
Score = 197 bits (218), Expect = 1e-45
Identities = 154/184 (84%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 108422 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 108481
|||||||| ||||||||||| ||||| |||||||||||||| |||||||||| || ||
Sbjct 417 GGTGGTCAGCACCTGAACGTAAACGTACTGCGTCGTGAAACGTTGGAAGATGCCGTGAAC 358
Query 108482 CATCCGGAAAAATATCCTCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAAC 108541
||||||||||||||||| ||| ||||||| || || ||||| ||||| || |||||||||
Sbjct 357 CATCCGGAAAAATATCCACAGTTGACCATTCGCGTTTCCGGCTATGCCGTGCGCTTTAAC 298
Query 108542 TCTCTGACTCCAGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAGAGTCTATAA 108601
| ||||| ||||| |||||||| || ||||| ||||||| ||||| || || || |||
Sbjct 297 GCGCTGACGCCAGAGCAGCAGCGTGATGTTATTACTCGTACATTTACCGAAAGCCTGTAA 238
Query 108602 TGGC 108605
| ||
Sbjct 237 TTGC 234
>seq85787
Length=1013
Score = 116 bits (128), Expect = 4e-21
Identities = 126/167 (75%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 108422 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 108481
||||||||||| |||||||| ||||| || |||||| | ||| ||||| | |
Sbjct 768 GGTGGTCAACATCTGAACGTCAACGTAATGAATCGTGAGATGCTGTTGGATGCCATGGAA 709
Query 108482 CATCCGGAAAAATATCCTCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAAC 108541
|||||||| |||||||| |||||||||||||| || || || ||||| || ||||| |||
Sbjct 708 CATCCGGAGAAATATCCGCAGCTGACCATCCGCGTTTCTGGCTATGCTGTACGCTTCAAC 649
Query 108542 TCTCTGACTCCAGAACAGCAGCGCGACGTTATCGCTCGTACCTTTAC 108588
|| || ||| ||| |||||| || || || | ||||| || ||
Sbjct 648 TCGCTCACTAAAGAGCAGCAGAAAGATGTAATTACACGTACTTTCAC 602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 540559336385600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |