Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq280 174 3e-38
seq322 154 3e-32
seq21746 140 6e-28
seq4530 136 8e-27
seq76387 109 1e-18
seq180 98.7 2e-15
>seq280
Length=341618
Score = 174 bits (192), Expect = 3e-38
Identities = 176/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | |||||| ||||| ||||| ||||| ||||| ||||| |||||||| |
Sbjct 106023 TACCACCACGGAGACGCAGGACTAAATGCAGGGTAGACTCTTTTTGTATGTTATAATCGG 106082
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | || ||||| || || || || || ||||||| | ||||||||||| |
Sbjct 106083 ACAAGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTG 106142
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||||||||| || || ||||| |||||||| || ||||| |||||| |
Sbjct 106143 GGATACCTTCCTTATCTTGGATTTTGGCTTTCACATTTTCGATAGTATCGGAAGGTTCAA 106202
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| ||| || || ||||| ||||| || || |||||||| |||||
Sbjct 106203 CCTCCAGAGTGATGGTTTTGCCAGTCAATGTTTTAACAAATATTTGCAT 106251
Score = 174 bits (192), Expect = 3e-38
Identities = 176/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | |||||| ||||| ||||| ||||| ||||| ||||| |||||||| |
Sbjct 114269 TACCACCACGGAGACGCAGGACTAAATGCAGGGTAGACTCTTTTTGTATGTTATAATCGG 114328
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | || ||||| || || || || || ||||||| | ||||||||||| |
Sbjct 114329 ACAAGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTG 114388
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||||||||| || || ||||| |||||||| || ||||| |||||| |
Sbjct 114389 GGATACCTTCCTTATCTTGGATTTTGGCTTTCACATTTTCGATAGTATCGGAAGGTTCAA 114448
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| ||| || || ||||| ||||| || || |||||||| |||||
Sbjct 114449 CCTCCAGAGTGATGGTTTTGCCAGTCAATGTTTTAACAAATATTTGCAT 114497
Score = 161 bits (178), Expect = 2e-34
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
||||||| | | |||| |||||| |||| |||||||| ||||| ||||| || ||||
Sbjct 106251 TACCTCCACGTAGGCGCAAAACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAG 106310
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | || || || | || || ||||| || |||| | |||||||||||| |
Sbjct 106311 ACAATGTGCGTCCATCCTCCAACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTG 106370
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| |||||||||||||| ||||| || ||||| ||||| ||||| ||||| ||| || |
Sbjct 106371 GGATTCCTTCCTTATCCTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAA 106430
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||||||| || || || || ||||| || || || || ||||||||
Sbjct 106431 CCTCCAAAGTGATGGTTTTACCCGTCAAAGTTTTGACGAAAATCTGCAT 106479
Score = 161 bits (178), Expect = 2e-34
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
||||||| | | |||| |||||| |||| |||||||| ||||| ||||| || ||||
Sbjct 114497 TACCTCCACGTAGGCGCAAAACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAG 114556
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | || || || | || || ||||| || |||| | |||||||||||| |
Sbjct 114557 ACAATGTGCGTCCATCCTCCAACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTG 114616
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| |||||||||||||| ||||| || ||||| ||||| ||||| ||||| ||| || |
Sbjct 114617 GGATTCCTTCCTTATCCTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAA 114676
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||||||| || || || || ||||| || || || || ||||||||
Sbjct 114677 CCTCCAAAGTGATGGTTTTACCCGTCAAAGTTTTGACGAAAATCTGCAT 114725
Score = 158 bits (174), Expect = 2e-33
Identities = 167/220 (76%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| ||||| | || || ||||| || || || || || ||||| || | | | ||
Sbjct 106492 ACGAAGAACCAGATGAAGTGTAGACTCCTTTTGGATGTTGTAATCGGACAAGGTGCGTCC 106551
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||| | |||||| || |||||||||| | ||| |||||||| || || || || ||
Sbjct 106552 GTCTTCCAATTGTTTGCCGGCAAAGATTAAACGTTGCTGATCTGGTGGAATACCCTCTTT 106611
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||||| ||||||||||| ||||| ||||| ||||| || |||| ||| ||
Sbjct 106612 GTCTTGAATCTTGGCTTTTACATTCTCAATAGTATCGGATGGTTCAACCTCCAGAGTGAT 106671
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814
|||||||| ||||| ||||| || || || |||||| ||
Sbjct 106672 GGTCTTGCCAGTCAAAGTCTTCACGAAGATTTGCATTTTT 106711
Score = 158 bits (174), Expect = 2e-33
Identities = 167/220 (76%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| ||||| | || || ||||| || || || || || ||||| || | | | ||
Sbjct 114738 ACGAAGAACCAGATGAAGTGTAGACTCCTTTTGGATGTTGTAATCGGACAAGGTGCGTCC 114797
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||| | |||||| || |||||||||| | ||| |||||||| || || || || ||
Sbjct 114798 GTCTTCCAATTGTTTGCCGGCAAAGATTAAACGTTGCTGATCTGGTGGAATACCCTCTTT 114857
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||||| ||||||||||| ||||| ||||| ||||| || |||| ||| ||
Sbjct 114858 GTCTTGAATCTTGGCTTTTACATTCTCAATAGTATCGGATGGTTCAACCTCCAGAGTGAT 114917
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814
|||||||| ||||| ||||| || || || |||||| ||
Sbjct 114918 GGTCTTGCCAGTCAAAGTCTTCACGAAGATTTGCATTTTT 114957
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | | ||| || || || || ||||| ||||| ||||| ||||| || || ||
Sbjct 104657 CCTCCGCGAAGACGAAGCACCAAATGGAGAGTCGATTCCTTCTGAATATTGTAGTCGGAC 104716
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | | |||||||| | ||||| || ||||| || | | ||||||||||||||
Sbjct 104717 AAAGTACGGCCGTCTTCCAACTGTTTACCGGCAAAAATCAAACGCTGTTGATCTGGAGGA 104776
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||||||||| || || || ||||| |||||||| || || || || || ||
Sbjct 104777 ATACCTTCCTTATCCTGGATTTTGGCTTTAACATTTTCGATGGTGTCTGACGGCTCAACC 104836
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || || || || |||| ||||| || || ||||||||
Sbjct 104837 TCCAAGGTGATGGTTTTACCGGTCAGTGTCTTCACGAAGATCTGCAT 104883
Score = 136 bits (150), Expect = 8e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | |||||| || || || || ||||| || || || || || || || |
Sbjct 105339 TACCACCACGGAGACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCCG 105398
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | |||||||| || || || |||||||| || | | ||| || |||||||
Sbjct 105399 ACAAGGTGCGCCCGTCTTCGAGCTGCTTACCAGCAAAAATCAAACGTTGCTGGTCTGGAG 105458
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||||||||| || || || |||||||| || || || || |
Sbjct 105459 GAATACCTTCCTTGTCTTGAATCTTGGCCTTGACGTTTTCAATGGTGTCGGATGGCTCAA 105518
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
| ||||| ||||| || ||||| |||| ||||| || || || ||||||
Sbjct 105519 CCTCCAAGGTTATAGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCATT 105568
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | || ||||||||| ||||| || ||||| || || || || || || || ||
Sbjct 105569 CCTCCGCGCAGACGCAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGAC 105628
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | || ||||| ||||| || || || ||||||| | || |||||||||||
Sbjct 105629 AAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGAGGA 105688
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || || ||||| ||||| || || ||||| || || || || ||
Sbjct 105689 ATACCCTCCTTGTCCTGGATCTTAGCTTTGACGTTCTCAATGGTGTCGGATGGCTCAACC 105748
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || || || || || | ||||| ||||||||||||||
Sbjct 105749 TCCAACGTGATGGTTTTACCAGTTAGGGTCTTCACAAATATCTGCAT 105795
Score = 134 bits (148), Expect = 3e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | |||||| || || ||||||||||| || || || || || || ||||
Sbjct 105795 TACCACCACGAAGACGCAGGACCAAATGCAGAGTAGACTCCTTTTGGATGTTGTAGTCAG 105854
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | || ||||| || ||||| || || ||||| | | || |||||||| |
Sbjct 105855 ACAAGGTGCGGCCATCTTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGG 105914
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||||||||| ||||| ||||| |||||||| || || || || || |
Sbjct 105915 GAATACCTTCCTTATCTTGGATCTTGGCTTTAACATTTTCGATGGTGTCTGATGGCTCAA 105974
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| ||||| || || || ||||| || | ||||| || || || |||||
Sbjct 105975 CCTCCAAGGTGATAGTTTTGCCAGTTAGGGTCTTCACGAAGATTTGCAT 106023
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | || ||||||||| ||||| || ||||| || || || || || || || ||
Sbjct 113815 CCTCCGCGCAGACGCAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGAC 113874
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | || ||||| ||||| || || || ||||||| | || |||||||||||
Sbjct 113875 AAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGAGGA 113934
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || || ||||| ||||| || || ||||| || || || || ||
Sbjct 113935 ATACCCTCCTTGTCCTGGATCTTAGCTTTGACGTTCTCAATGGTGTCGGATGGCTCAACC 113994
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || || || || || | ||||| ||||||||||||||
Sbjct 113995 TCCAACGTGATGGTTTTACCAGTTAGGGTCTTCACAAATATCTGCAT 114041
Score = 134 bits (148), Expect = 3e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | |||||| || || ||||||||||| || || || || || || ||||
Sbjct 114041 TACCACCACGAAGACGCAGGACCAAATGCAGAGTAGACTCCTTTTGGATGTTGTAGTCAG 114100
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | || ||||| || ||||| || || ||||| | | || |||||||| |
Sbjct 114101 ACAAGGTGCGGCCATCTTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGG 114160
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||||||||| ||||| ||||| |||||||| || || || || || |
Sbjct 114161 GAATACCTTCCTTATCTTGGATCTTGGCTTTAACATTTTCGATGGTGTCTGATGGCTCAA 114220
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| ||||| || || || ||||| || | ||||| || || || |||||
Sbjct 114221 CCTCCAAGGTGATAGTTTTGCCAGTTAGGGTCTTCACGAAGATTTGCAT 114269
Score = 120 bits (132), Expect = 6e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | |||||| || || || || ||||| || || || || || || || |
Sbjct 105111 TACCACCGCGAAGACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCCG 105170
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | |||||||| | |||||| || || || || | | ||||||||||||||
Sbjct 105171 ACAAGGTGCGGCCGTCTTCCAATTGTTTACCGGCGAAAATCAAACGTTGTTGATCTGGAG 105230
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||| |||||||||||||| || || || ||||| || || || || || |
Sbjct 105231 GAATGCCTTCTTTATCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCTGACGGCTCAA 105290
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| ||||| || || || || || || | ||||| || || || |||||
Sbjct 105291 CCTCCAAGGTGATGGTTTTACCAGTTAGGGTCTTCACGAAGATTTGCAT 105339
Score = 120 bits (132), Expect = 6e-22
Identities = 122/159 (77%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
|||||||| || || || |||||||| || | | ||| || |||||||| || ||||||
Sbjct 113656 CCGTCTTCGAGCTGCTTACCAGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCC 113715
Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772
|| ||||||||||| || || || |||||||| || || || || || ||||| |||
Sbjct 113716 TTGTCTTGAATCTTGGCCTTGACGTTTTCAATGGTGTCGGATGGCTCAACCTCCAAGGTT 113775
Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|| || ||||| |||| ||||| || || || ||||||
Sbjct 113776 ATAGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCATT 113814
Score = 116 bits (128), Expect = 7e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | |||||| || || || || ||||| || || || || |||||||| |
Sbjct 104883 TACCACCGCGAAGACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTATAATCGG 104942
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | | || ||||| || || || || || ||||||| | ||||||||||| |
Sbjct 104943 ACAAAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTG 105002
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||| || || || ||||| || || || || || || || || || || |
Sbjct 105003 GGATACCTTCTTTGTCCTGGATCTTGGCCTTAACGTTCTCGATGGTGTCTGACGGCTCAA 105062
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| ||||| || || || ||||| |||| ||||| || || || |||||
Sbjct 105063 CCTCCAAGGTGATGGTTTTGCCAGTCAGAGTCTTGACGAAAATTTGCAT 105111
>seq322
Length=316913
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
|||||| || | || || ||||| || | ||||||||| || || ||||| ||||| |
Sbjct 56201 ACCTCCCCTGAGCCGAAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAATCGGC 56260
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| ||| || ||||||| ||| ||||| || || ||||| | ||||||||||||||
Sbjct 56261 TAAGGTTCGCCCATCTTCTAATTGCTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGAGG 56320
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||| |||||||| || || || |||| ||||| ||||| ||| || ||
Sbjct 56321 GATCCCTTCCTTGTCTTGAATTTTCGCCTTAACATGCTCAATTGTATCCGAAGGCTCAAC 56380
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | ||| || |||||||| || | ||||| || || || |||||
Sbjct 56381 CTCAAGAGTAATAGTCTTGCCCGTTAGGGTCTTAACGAAAATTTGCAT 56428
Score = 136 bits (150), Expect = 8e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
|||||| || | || || ||||| || | ||||||||| || || ||||| ||| | |
Sbjct 38760 ACCTCCCCTGAGCCGAAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAACCGGC 38701
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| ||| || ||||| ||||||||| || || ||||| | ||||||||||| ||
Sbjct 38700 TAAGGTTCGCCCATCTTCCTATTGTTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGGGG 38641
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| ||| |||| |||||||| ||||| || |||| ||||| ||||| ||| || ||
Sbjct 38640 GATCCCTCCCTTGTCTTGAATTTTTGCCTTCACATGCTCAATTGTATCCGAAGGCTCAAC 38581
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | ||| || ||||||| || | ||||| || || || |||||
Sbjct 38580 CTCAAGAGTAATAGTCTTGCGCGTTAGGGTCTTAACGAAAATTTGCAT 38533
Score = 86.0 bits (94), Expect = 1e-11
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 82664 TTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAAT 82723
||||||||| || || ||||| | ||||||||||| || |||||| |||| ||||||||
Sbjct 34871 TTGTTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGGGGGATTCCTCCCTTGTCTTGAAT 34812
Query 82724 CTTTGCTTTTACATTTTCAATCGTATC 82750
||||| || |||| ||||| |||||
Sbjct 34811 TTTTGCCTTCACATGCTCAATTGTATC 34785
>seq21746
Length=7614
Score = 140 bits (154), Expect = 6e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | || ||||| || ||||| || || || || || || || || || || |
Sbjct 2424 TACCACCACGCAGACGCAACACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCGG 2365
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | | ||| ||||| | ||| || || || || || | | |||||||||||| |
Sbjct 2364 ACAAAGTACGACCATCTTCCAATTGCTTGCCGGCGAAAATCAAACGTTGTTGATCTGGTG 2305
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
|||| ||||| |||||||| || || || || |||||||| || || ||| ||| || |
Sbjct 2304 GTATACCTTCTTTATCTTGGATTTTAGCCTTGACATTTTCGATAGTGTCAGAAGGCTCGA 2245
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
| |||||||| || |||||||| || | || || || || |||||||||
Sbjct 2244 CCTCCAAAGTGATGGTCTTGCCCGTAAGTGTTTTGACGAAAATCTGCATT 2195
>seq4530
Length=49833
Score = 136 bits (150), Expect = 8e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
|||||| || | || || ||||| || | ||||||||| || || ||||| ||| | |
Sbjct 18534 ACCTCCCCTGAGCCGAAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAACCGGC 18475
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| ||| || ||||| ||||||||| || || ||||| | ||||||||||| ||
Sbjct 18474 TAAGGTTCGCCCATCTTCCTATTGTTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGGGG 18415
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| ||| |||| |||||||| ||||| || |||| ||||| ||||| ||| || ||
Sbjct 18414 GATCCCTCCCTTGTCTTGAATTTTTGCCTTCACATGCTCAATTGTATCCGAAGGCTCAAC 18355
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | ||| || ||||||| || | ||||| || || || |||||
Sbjct 18354 CTCAAGAGTAATAGTCTTGCGCGTTAGGGTCTTAACGAAAATTTGCAT 18307
>seq76387
Length=1185
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 82581 CTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCA 82640
|| || || | || ||| || || | ||| || || || || || || || || || ||
Sbjct 186 CTGCCGCCGCGCAGACGAAGGACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCC 245
Query 82641 GATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGA 82700
|| || | | ||||| || || || || || || ||||| || | || || || ||
Sbjct 246 GAGAGGGTGCGCCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 305
Query 82701 GGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760
|| || || ||||| ||||| ||||| || || ||||| ||||| || || | || ||
Sbjct 306 GGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATGGTGTCGCTGGGCTCC 365
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | ||| ||||||||||| || | ||||| || || ||||||||
Sbjct 366 ACCTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 415
Score = 107 bits (118), Expect = 4e-18
Identities = 119/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 82652 ACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTC 82711
|||||| || ||||| || ||||| ||||| || | || || || || || || || ||
Sbjct 602 ACCGTCCTCGAGTTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTC 661
Query 82712 CTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGT 82771
||| ||||| ||||| || || ||||| ||||| || || | || || || || | |||
Sbjct 662 CTTGTCTTGGATCTTCGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCGAGAGT 721
Query 82772 TATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||||||| || | ||||| || || ||||||||
Sbjct 722 GATCGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 760
>seq180
Length=417715
Score = 98.7 bits (108), Expect = 2e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 198309 CAACTCGAAAAGGCGGAAACACATGACCCTCTATGGAATGCATCGCAAATACAGATGATA 198368
||| |||| |||| | ||||| || ||| |||||||| | || | || || |
Sbjct 110271 CAATTCGAGCAGGCCCACACACACGATGATCTTTGGAATGCGGCACAGGTTCAATTGGCA 110330
Query 198369 AGAGAAGGAAAAATGCATAGTTTTTTAAGAATGTACTGGGCTAAAAAGATACTTGAATGG 198428
| ||||| ||||||||| ||||| || | ||||||||||| ||||||||||||||||||
Sbjct 110331 AATGAAGGCAAAATGCATGGTTTTCTACGCATGTACTGGGCAAAAAAGATACTTGAATGG 110390
Query 198429 ACAAGAACACCGGAAGACGCTTTGAGTTATAG-TATCTATCTAAACAATAAGTACGAACT 198487
| || |||||| | || || || || | |||||| | || | || ||| |
Sbjct 110391 GCCGCTACGCCGGAACAAGCCTT-AGAAATTGCTATCTACTTGAATGACAAATACAGTTT 110449
Query 198488 AGACGGCACGGATCCTAACGGATACGTAGGT 198518
||| || |||||| ||||| || ||||||
Sbjct 110450 AGATGGACGGGATCCAAACGGCTATGTAGGT 110480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 980736920781130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |